KEGG   Physcomitrium patens (spreading earthmoss): 112295784
Entry
112295784         CDS       T01041                                 
Name
(RefSeq) RING-box protein 1a
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
ppp  Physcomitrium patens (spreading earthmoss)
Pathway
ppp03420  Nucleotide excision repair
ppp04120  Ubiquitin mediated proteolysis
ppp04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:ppp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    112295784
   04120 Ubiquitin mediated proteolysis
    112295784
  09124 Replication and repair
   03420 Nucleotide excision repair
    112295784
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ppp04121]
    112295784
   03400 DNA repair and recombination proteins [BR:ppp03400]
    112295784
Enzymes [BR:ppp01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     112295784
Ubiquitin system [BR:ppp04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   112295784
  Multi subunit type E3
   SCF complex
    Ring finger protein
     112295784
   Cul2 complex
     112295784
   Cul3 complex
     112295784
   Cul4 complex
     112295784
   Cul7 complex
     112295784
   Cul8 complex
     112295784
   Cul9 complex
     112295784
DNA repair and recombination proteins [BR:ppp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      112295784
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      112295784
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 DUF8003
Other DBs
NCBI-GeneID: 112295784
NCBI-ProteinID: XP_024403498
LinkDB
Position
19:3224795..3226706
AA seq 126 aa
MPDRSRKMAGTDTDTLTVPSGEGLSAGASSSAVTKRAKRFEIKKWNAVALWAWDIVVDNC
AICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWE
FQKYGR
NT seq 381 nt   +upstreamnt  +downstreamnt
atgcccgatcgaagtcgtaagatggccggcactgacaccgacacgttgacggtgccatcc
ggcgagggattgagcgcgggtgctagttcgagtgcggtgaccaagcgggctaagcggttt
gagatcaagaagtggaatgcggttgcactttgggcttgggatatcgtcgtggataattgc
gctatttgccgtaatcacatcatggacctatgtattgagtgccaagcaaaccaagcaagt
gccaccagtgaggaatgcactgtagcgtggggcgtttgcaatcatgcattccatttccat
tgtattagcaggtggctaaagaccagacaagtttgccctctggacaacagtgaatgggag
ttccagaagtatggacgttga

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