Paenibacillus polymyxa SQR-21: PPSQR21_046760
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Entry
PPSQR21_046760 CDS
T03178
Name
(GenBank) rnd transporter hydrophobe/amphiphile efflux-1 (hae1) and heavy metal efflux (hme) families, permease
KO
K18138
multidrug efflux pump
Organism
ppq
Paenibacillus polymyxa SQR-21
Pathway
ppq01501
beta-Lactam resistance
ppq01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
ppq00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PPSQR21_046760
01503 Cationic antimicrobial peptide (CAMP) resistance
PPSQR21_046760
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppq02000
]
PPSQR21_046760
01504 Antimicrobial resistance genes [BR:
ppq01504
]
PPSQR21_046760
Transporters [BR:
ppq02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
PPSQR21_046760
Antimicrobial resistance genes [BR:
ppq01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
PPSQR21_046760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
PH_40
Motif
Other DBs
NCBI-ProteinID:
AHM68260
LinkDB
All DBs
Position
5297807..5300923
Genome browser
AA seq
1038 aa
AA seq
DB search
MIEYIVKKRKITLLFFVMLIVVGAFGFFQLPQQEMPDVTIQNAMVTTVYPGASPQKVEQT
VTKELEKRIKEVEGVKTINSTSGNGFSSILIESKNGVDPQTVWDNMRKKVQDAQADLPQG
AEVPVVNDKLTSSFIGSYALTADSSAPLYKLNDLTTNWKDQLNTISGVSSVKFNGLPDQE
VRVHIDNQKLQQYQLSWGQVAQAIQSQIDRVPTGNIEYNGRTYQLIVRETEKADELNQVI
LTRTKEGNPVYLRDIGTTELAHPEAEYFAYVEGKPAITLSIGAETGTDIPSMSEKVNTKL
KELEKTLPVGVHLQTLFAQKDQVNHIFDDLKRETILAIAAVILVCMLGLNLLTSAFVALA
IPISVSIAIIFLPMFGITLNQISVVGLIIVLGILVDDAVVVNDNIERRLTELGESPSVAA
IKGTKEVMLSILVATLATISAFAPLLFLPGNVGAFIRPIPAIVSLTMLASMIMSLTIIPI
FREWYEKRRQTRHPQGKSKPVGLLGQQIHSLNKLYSQKLMPKVIQRPLLTAMVGLMLGTA
AYGLVPFTSVELFPESEDPHVALNVKMPVGTSIAETDQVVKDLAGWIKKQPETSKVVYSA
GGTAPQLFSDINSMGGNITYNETVGQIAVVGKENVFDLNSTVDAWEQHVKKSYPGVTVTM
YVPRLGIPVGKPVSIRISGQDLNELQTLAQKAKEQIATVEGTTGIVDDIGIERYALELEV
NKQAMDQYLVSYTDLTRTLLLLKEGAQVSQFDTGSSLVDIKMYLNHSNEEPSKLFQQLSV
VNAAGKQIPLNQLVQIKPSFAIQQIKHYNMERTITVEADLNGRTASEAMVDVEGKLAQMK
FPEGYKWEVGGETSDQSTIFADLGKLAIVVVLLILLLITMQFYSLSIPIIIMTTVYLAAA
GGIIGIFLTGMPIGFMSIMGIIALAGIVVRNGIVLIEFIEDARHEGMELKEAVIQAAAAR
FRPILLTSLAAIVGMIPLALLGSLLFKPLAFTVIFGLLFSTLLTLFVVPSLYMIMAKYKM
HRQLKKQQHTVITRDQPL
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atgattgagtacatcgtaaaaaagcgaaaaataacattgctgttttttgtcatgctgatt
gtagttggagctttcggttttttccagttaccacagcaggaaatgccagacgtgaccata
cagaatgctatggtcacaaccgtttaccccggtgcttcgccacaaaaggtagaacaaacc
gtaactaaagagctagagaaacgcatcaaggaggttgaaggtgttaaaacgattaattcg
acttctggcaacggattctcctctattctaatcgaatccaaaaatggagtggatcctcag
acagtttgggataatatgcgtaaaaaggtgcaagatgcacaagccgatcttcctcaaggt
gctgaggtgcctgttgtaaatgacaagctgaccagctcgtttatcggctcttatgctctg
accgccgactcatctgcaccactgtataaactaaatgatttgaccaccaactggaaagat
caacttaatacgatttccggcgtatccagtgtcaaattcaatggtcttcctgaccaagaa
gtacgtgtccatatcgacaatcagaagctccagcaatatcagttgtcgtggggacaagtg
gcacaagcgatccaatctcagatcgatcgagttcctaccggtaatattgaatacaacgga
cgtacctatcaactcattgttcgtgagaccgaaaaagctgacgaattaaatcaggtcatt
ttgacacgtacaaaggaaggtaatcctgtttatttaagagatattggaacaactgagctg
gcacatcctgaggcagaatatttcgcttatgtagagggtaaaccggccattacgctaagt
attggagcggaaacaggcacagacatcccctctatgagcgaaaaggtcaataccaagctc
aaggagctggagaaaacactccccgtaggtgttcacttacagactctctttgcacaaaag
gatcaggtaaaccatatctttgacgacttaaagcgtgaaacgattctggcaattgcggct
gttattctcgtttgtatgttgggcttgaatttgctcacctctgcttttgtcgcgctggca
atccctatttcggtttcgattgccattatctttctacctatgttcggcattactttaaat
cagatttccgttgtcggtctgatcattgtactcggcatactcgtggatgatgctgtagtg
gtaaacgataatattgagcgcagacttacggaattaggagaatcaccctccgttgcagct
ataaaaggtaccaaagaggtcatgctgtctattttggttgcaacattggccaccatctca
gctttcgctccactgttgtttcttcccggaaatgtaggtgcctttattagacccattccc
gccattgtttctctgaccatgttagcctctatgatcatgtccctcacgatcatccctatt
tttcgagaatggtatgaaaagcgcagacagactcgtcatcctcaggggaaatcaaaacca
gtaggcttgctcggtcagcagattcactctttaaacaagctttattcacaaaagctgatg
cctaaagtcattcagcgtcccttgctgacggctatggttggactcatgcttggaacagct
gcttatggattagttccctttacatccgttgagcttttccctgaatcggaagaccctcat
gttgcactaaatgtaaaaatgcctgtaggcacttccattgcggaaaccgaccaggtcgtt
aaagatcttgcaggctggatcaagaagcaacctgaaacttccaaggtcgtttacagcgca
ggagggactgctccccaactgtttagtgacattaatagcatgggtggaaatattacttat
aacgaaaccgtaggtcagattgctgtcgtcggaaaagagaacgttttcgatctcaattcg
acagttgatgcctgggaacaacatgttaagaaatcctaccctggcgtcacggttactatg
tatgttccccgtcttgggattccagtaggtaaacccgtttctattcgtatctcaggtcag
gatttaaatgaactgcaaacccttgcccaaaaagcaaaggagcagatcgcgacagtagag
ggcacaacgggcatcgtagatgacataggaattgaacgatatgccctcgagcttgaggtc
aacaaacaagccatggatcagtatctagtaagctacacagatttgactcgtacccttctt
ctgttaaaagaaggagctcaagtcagtcaattcgatactggaagcagtctggtagatatc
aaaatgtatttgaatcacagtaacgaggagccaagtaagcttttccaacaactaagtgta
gtgaatgcagccggaaagcaaattccattaaaccagctagtacagattaagccgtcattt
gctattcagcaaatcaagcattacaatatggagcggacgattacagtcgaagccgacttg
aacggacgaactgcaagcgaagccatggtagatgtggaaggcaaactggcacaaatgaag
ttccctgaaggctataaatgggaggtaggcggtgaaacatccgatcagtctaccatattc
gcggatttagggaagctggcgatcgttgtagtcttactcattctactcttgatcacgatg
cagttttattcactctccattcctattattattatgacaaccgtgtacctagcagcagcc
ggcgggataattggtatttttctgactggtatgcccatcggttttatgagcatcatggga
attatcgcacttgcgggcattgttgtgaggaatgggattgtcttaattgaatttatcgag
gatgcaagacatgaaggaatggaattaaaggaagccgtaatacaagcggccgctgctcgt
ttcagaccgattttattgacttccctggctgccattgtaggtatgattcccttagcacta
ttgggaagcctgctctttaagccactagcgttcaccgttattttcggtttgttattttcg
accttgttaactttgtttgtggtgccgtccttgtatatgatcatggccaagtacaagatg
caccgacaactcaaaaaacagcagcacacagttattacacgtgaccaacctttgtaa
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