Photobacterium profundum: PBPRA2566
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Entry
PBPRA2566 CDS
T00173
Symbol
STY1669
Name
(GenBank) Putative endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
ppr
Photobacterium profundum
Pathway
ppr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PBPRA2566 (STY1669)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppr03400
]
PBPRA2566 (STY1669)
Enzymes [BR:
ppr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
PBPRA2566 (STY1669)
DNA repair and recombination proteins [BR:
ppr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PBPRA2566 (STY1669)
Prokaryotic type
PBPRA2566 (STY1669)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
CAG20945
UniProt:
Q6LP31
LinkDB
All DBs
Position
1:2973340..2973981
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AA seq
213 aa
AA seq
DB search
MNNQKRTQILERLRAENPHPETELKWSSPFELLIAVLLSAQATDVSVNKATDKLYPIANT
PQAIYDLGVEGVKTYIKTIGLFNSKAENVIKTCKILLNKHNGEIPEDREALEALPGVGRK
TANVVLNTAFGWPTIAVDTHIFRVSNRTKFAMGKNVDQVEEKLLKVVPTEFKVDVHHWFI
LHGRYTCIARKPRCGSCIIEDLCEFKDKIYPDE
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgaacaatcaaaaacgtacccaaattctagaacgcttacgggcagaaaaccctcaccct
gaaacggagttgaagtggagttctcccttcgagctactgattgctgtgctcttatccgct
caagctacagacgtgagtgtgaacaaggcaacagataaactctaccctatcgcaaatacg
ccacaggctatctacgatttgggtgttgaaggggttaaaacgtacattaaaaccattggg
ttatttaattccaaagctgaaaacgtcattaagacctgtaagattttactgaataaacac
aatggtgaaattccagaagatcgtgaagcgctagaagcactaccaggtgttgggcgaaaa
acagcgaatgtagtgctaaatacagcgtttggctggccgacgattgccgttgatacccat
atctttcgcgtgtcgaatcgtactaaatttgccatgggtaaaaatgttgaccaagtagaa
gaaaaactgcttaaagtcgtgccaacagaattcaaagtggatgtgcaccactggtttatt
ctacacggacgttatacctgcatagcacgtaaacctcgctgtggcagctgtattattgaa
gacctctgtgaattcaaagacaaaatataccctgacgaataa
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