Photobacterium profundum: PBPRA3220
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Entry
PBPRA3220 CDS
T00173
Symbol
S0084
Name
(GenBank) putative UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelateligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
ppr
Photobacterium profundum
Pathway
ppr00300
Lysine biosynthesis
ppr00550
Peptidoglycan biosynthesis
ppr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppr00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PBPRA3220 (S0084)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PBPRA3220 (S0084)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppr01011
]
PBPRA3220 (S0084)
Enzymes [BR:
ppr01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
PBPRA3220 (S0084)
Peptidoglycan biosynthesis and degradation proteins [BR:
ppr01011
]
Precursor biosynthesis
Amino acid ligase
PBPRA3220 (S0084)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
CAG21526
UniProt:
Q6LMF1
LinkDB
All DBs
Position
1:complement(3658724..3660244)
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AA seq
506 aa
AA seq
DB search
MLSPSQSITLGSLLSPWMATSDWQEKWREHSVVNMTIDSRQIEADDLFVAVNGHAVDGRG
FIPAAINAGATAVLAEADNIAKHGDIVEQDGIVIIYFQQLNQYLSAIANRFYAQPDTRLK
LLAVTGTNGKTTISQLLAQWANLIGYNAGVMGTTGNGLLNSLTPAVNTTGNAIEIPHVLH
DLVDQGADFAAMEISSHGLVQGRVKALQFVASIFTNLSRDHLDYHGDMANYADAKKCLFT
EHQAGIPVINADDDIGFTWLADLPHAVAVVTDKARLGEHYQGQALWLTDVMYSTQGVNIS
FDSSWGAGQFTAPLVGSFNVSNLLLALATLLALGHSIDKLIATAPHLTAVIGRMEVFQSP
DKPMVVVDYAHTPDALEKALQALRVHCQGKLWCIFGCGGDRDTGKRPMMAEISERLADRI
IITDDNPRTEAPAAIVSDMLQGLALPQQAQVIHDRKLACTYAIEHAQVNDIILLAGKGHE
DYQVLADRTIHYSDRETVQALFGEIA
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgttaagtcctagtcaatcgatcacacttggttcattgctttcaccgtggatggcaaca
tctgattggcaagaaaagtggcgtgaacacagtgtggtgaatatgacgattgatagtcgt
caaattgaagccgatgacttattcgttgcggttaatggtcatgccgttgatggtcgtggc
tttattccggcggcaattaacgctggggcaaccgctgttctcgctgaagccgacaatatc
gctaaacatggcgatattgttgagcaagacggtatcgtgattatttattttcagcaattg
aatcagtacctttcagcaattgccaaccgcttttatgcccaacccgatacacgtcttaaa
ttattggctgtgacaggtacgaatgggaaaaccaccattagccaactgttagcacaatgg
gcgaatctcattggttataacgcaggagttatgggcacgactggcaatggtttgttaaat
agccttactcctgcggtgaataccacgggtaatgcgattgaaatccctcatgtattgcat
gatcttgtcgatcaaggtgctgattttgccgcaatggaaatttcatcacacgggctagtg
caaggacgcgttaaagccttgcagttcgttgccagtatctttaccaatttaagccgcgat
caccttgattatcatggtgatatggcaaattacgctgatgccaaaaaatgtttgtttacc
gaacatcaagcgggcataccggttattaacgccgatgatgatataggctttacttggtta
gccgatttgccccatgccgtcgcggttgtaacggataaagcccgtttaggcgagcattat
cagggacaagcgttatggttaacggatgtcatgtacagcactcaaggcgttaatataagc
tttgattctagctggggggctggtcagtttacagcaccgcttgttggctcatttaatgtg
tcgaatctattgctggcactcgcgacattattagcgttagggcactctattgataaattg
attgcaacagcaccacacttgactgcagtgattggtcggatggaagtttttcaaagtcct
gacaaacctatggtagtggttgattatgctcatacgccagatgctttagaaaaggcactg
caagcgttacgtgtgcattgtcagggcaagttgtggtgtatctttggctgcggtggcgac
cgagatacgggtaagcgtcctatgatggctgaaatatcagaacgcttagctgatcggata
attataacggatgacaatccgcgcacagaagcgccagccgctatcgtcagtgatatgttg
caagggttagcattaccacagcaagcacaagtgatccacgatcgtaaattagcctgcact
tatgcaatcgagcatgcacaggtgaatgacattattttattagcaggaaaaggtcatgag
gattaccaagttctcgccgatcgaaccattcattattccgaccgtgaaacggtgcaagct
ttatttggggaaatagcatga
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