Pseudomonas protegens CHA0: PFLCHA0_c48310
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Entry
PFLCHA0_c48310 CDS
T02671
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
pprc
Pseudomonas protegens CHA0
Pathway
pprc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pprc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PFLCHA0_c48310 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pprc03400
]
PFLCHA0_c48310 (nth)
Enzymes [BR:
pprc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
PFLCHA0_c48310 (nth)
DNA repair and recombination proteins [BR:
pprc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PFLCHA0_c48310 (nth)
Prokaryotic type
PFLCHA0_c48310 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
Ogg-HhH
HHH_5
HHH_8
DUF2400
Motif
Other DBs
NCBI-ProteinID:
AGL86581
UniProt:
A0A2C9ESJ6
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All DBs
Position
5431064..5431702
Genome browser
AA seq
212 aa
AA seq
DB search
MNAAKRLEIFRRLHEDNPEPKTELAYSSPFELLIAVILSAQSTDVGVNKATARLFPVANT
PAAIYALGVEGLSEYIKTIGLYNSKAKNVIETCRLLVERHNSEVPQTREELEALPGVGRK
TANVVLNTAFRQLTMAVDTHIFRVSNRTGLAPGKNVVEVEKKLMKFVPKEFLLDSHHWLI
LHGRYVCLARKPRCGSCRIEDLCEYKQKTSDD
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgaatgccgccaaacgcctggaaatctttcgccggctacacgaagacaaccccgaaccg
aaaaccgagctggcctattcctcgccgttcgagctgctgatcgcggtgattctctcggcg
caatcgaccgacgtcggggtcaacaaggcaactgccaggctcttccccgtagccaatacc
ccagcggcaatctacgccctgggtgtcgaaggcctgtccgaatacatcaagaccatcggc
ctgtacaacagcaaggccaagaacgtcatcgagacctgccgcctgctggtggaacgccat
aacagcgaagtgccacagacccgggaagagctggaggctctgcccggggtgggccgcaag
accgccaacgtggtcctcaacaccgctttccggcaactgaccatggcggtggacacccat
atcttccgggtcagcaaccgaaccgggctggccccgggaaagaacgtggtcgaggtcgaa
aagaaactcatgaagttcgtgcccaaggagtttctgctggactcccatcactggctgatc
ctccacggccgctacgtttgcctggcacgcaagccacgctgtggcagctgtcgaatcgaa
gacctgtgcgaatacaagcaaaagacttccgacgattga
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