Pseudomonas protegens CHA0: PFLCHA0_c50300
Help
Entry
PFLCHA0_c50300 CDS
T02671
Symbol
lpxC
Name
(GenBank) UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase LpxC
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
pprc
Pseudomonas protegens CHA0
Pathway
pprc00540
Lipopolysaccharide biosynthesis
pprc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pprc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
PFLCHA0_c50300 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pprc01005
]
PFLCHA0_c50300 (lpxC)
Enzymes [BR:
pprc01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
PFLCHA0_c50300 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
pprc01005
]
Lipid A
PFLCHA0_c50300 (lpxC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
Motif
Other DBs
NCBI-ProteinID:
AGL86779
UniProt:
A0A2C9ET53
LinkDB
All DBs
Position
complement(5637671..5638582)
Genome browser
AA seq
303 aa
AA seq
DB search
MIKQRTLKNIIRATGVGLHSGEKVYLTLKPAPVDTGIVFCRADLDPVVQIPARAENVGET
TMSTTLVNGDVKVDTVEHLLSAMAGLGIDNAYVELSASEVPIMDGSAGPFVFLIQSAGLE
EQDAAKKFIRILREVTVEDGDKRATFVPFDGFKVSFEIDFDHPVFRDRTQSASVDFSSTS
FVKEVSRARTFGFMSDIEYLRKHNLALGGSVENAIVVDSDGVLNEDGLRYEDEFVKHKIL
DAIGDLYLLGNSLIGEFKGFKSGHALNNQLLRKLIEQKDAWEVVTFEDASTAPISYMRPV
AAV
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgattaaacaacgcaccctgaagaatattatccgtgccacaggtgtaggcctgcattcc
ggggagaaggtatacctgaccctcaagcctgcgcctgtcgacaccggcattgtgttttgt
cgtgccgacctggaccctgtggtgcagattcctgctcgcgcggaaaatgttggcgaaacc
acgatgtcgaccactctggtcaacggtgacgtcaaagtggacacggtggagcacttgctc
tcggccatggctggcctgggcatcgataacgcctacgtcgagctctccgcgtctgaagtc
ccgatcatggatggcagtgccggacccttcgtattcctgattcaatctgctggcctcgaa
gaacaggacgcagctaaaaagttcatccgcatccttcgtgaagtgaccgtggaagacggc
gacaagcgcgccactttcgtgcctttcgatggttttaaagtgagcttcgagatcgatttc
gatcacccggttttccgtgaccgcacccagagtgcaagcgtggacttctccagtacttcg
tttgtaaaagaagtcagccgcgcccgtacctttggtttcatgagtgatatcgagtacctg
cgcaagcacaacctcgcactcggcggcagcgtggaaaacgcaattgtggtcgattcggat
ggcgtactgaatgaagacggtcttcgctacgaagacgaattcgtcaagcacaagatcctg
gatgcaattggcgacctctacctgctgggcaacagcctgataggtgagttcaaaggcttc
aagtcgggccatgcactgaacaaccagctactgcgcaagttgattgagcagaaagatgcc
tgggaagtcgtgaccttcgaagatgccagcactgcaccgatctcttacatgcgtccggtt
gcggccgtgtaa
DBGET
integrated database retrieval system
