Pseudodesulfovibrio profundus: DPRO_0100
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Entry
DPRO_0100 CDS
T05258
Symbol
vsr
Name
(GenBank) XorII very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
pprf
Pseudodesulfovibrio profundus
Brite
KEGG Orthology (KO) [BR:
pprf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pprf03400
]
DPRO_0100 (vsr)
DNA repair and recombination proteins [BR:
pprf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
DPRO_0100 (vsr)
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Gene cluster
GFIT
Motif
Pfam:
Vsr
MTES_1575
DUF559
Motif
Other DBs
NCBI-ProteinID:
SOB56978
UniProt:
A0A2C8F585
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All DBs
Position
DPRO:complement(103437..103841)
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AA seq
134 aa
AA seq
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MSKIKGKNTKPEVAVRQYLHRKGYRFRLHRKDLPGNPDIVLPSRMIAIFVHGCFWHRHRG
CKKTTTPSTNRAFWERKFKDNVNRDERNTQALQKLGWAVMVIWECEVNDQGLETIAAKVE
SIPQKMKMSSTKRT
NT seq
405 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaataaaaggcaaaaacaccaagcctgaagttgcggtacgtcaatacctccac
cgcaagggttatcggttccgtcttcacagaaaggatcttcccggcaatccggatatagtt
ctaccaagccgcatgatcgcgatttttgttcacggctgcttttggcatcgtcatcgtggc
tgcaaaaaaacgacaacaccttccaccaaccgggcattttgggaacgaaaattcaaagac
aatgtgaatagagacgagcgcaacacacaagcactgcaaaaacttggttgggcagtcatg
gtgatctgggagtgcgaagtcaatgatcaaggtcttgaaacaatagctgccaaagttgaa
agtatcccccaaaagatgaaaatgtcctcaacaaaacgcacgtaa
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