| Entry | T05258 |
| Org code | pprf |
| Name | Pseudodesulfovibrio profundus 500-1 |
| Category | Type strain |
| Annotation | yes |
| Taxonomy | TAX: 57320 |
| Lineage | Bacteria; Pseudomonadati; Thermodesulfobacteriota; Desulfovibrionia; Desulfovibrionales; Desulfovibrionaceae; Pseudodesulfovibrio |
| Brite | KEGG organisms [BR:br08601]
KEGG organisms in the NCBI taxonomy [BR:br08610]
KEGG organisms in taxonomic ranks [BR:br08611] |
| Data source | GenBank (Assembly: GCA_900217235.1 Complete Genome)
BioProject: 411801 |
| Comment | Piezophilic sulfate-reducing bacterium.
Isolated in the Japan Sea from a sediment layer at 500-m depth under a water column of 1,000 m.
|
| Chromosome | DPRO; Circular |
| Sequence | GB: LT907975 |
| Length | 4168905 |
| Plasmid | paDPRO; Circular |
| Sequence | GB: LT907976 |
| Length | 42836 |
| Plasmid | pbDPRO; Circular |
| Sequence | GB: LT907977 |
| Length | 6167 |
| Statistics | Number of nucleotides: 4217908
Number of protein genes: 4058
Number of RNA genes: 78
|
| Created | 2018 |
| Reference | PMID: 29097459 |
| Authors | Fouteau S, Guerin T, Magdelenat G, Roumagnac M, Bartoli M, Ollivier B, Dolla A, Barbe V, Pradel N |
| Title | Genome Sequence of Piezophilic Bacterium Desulfovibrio profundus Strain 500-1, Isolated from a Deep Sediment Layer in the Japan Sea. |
| Journal | Genome Announc 5:e01181-17 (2017)
DOI: 10.1128/genomeA.01181-17 |
Pseudodesulfovibrio profundus