Pseudodesulfovibrio profundus: DPRO_0163
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Entry
DPRO_0163 CDS
T05258
Symbol
rffG
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
pprf
Pseudodesulfovibrio profundus
Pathway
pprf00521
Streptomycin biosynthesis
pprf00523
Polyketide sugar unit biosynthesis
pprf00525
Acarbose and validamycin biosynthesis
pprf00541
Biosynthesis of various nucleotide sugars
pprf01100
Metabolic pathways
pprf01110
Biosynthesis of secondary metabolites
pprf01250
Biosynthesis of nucleotide sugars
Module
pprf_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
pprf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
DPRO_0163 (rffG)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
DPRO_0163 (rffG)
01055 Biosynthesis of vancomycin group antibiotics
DPRO_0163 (rffG)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
DPRO_0163 (rffG)
00525 Acarbose and validamycin biosynthesis
DPRO_0163 (rffG)
Enzymes [BR:
pprf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
DPRO_0163 (rffG)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
NAD_binding_10
KR
adh_short
Sacchrp_dh_NADP
Statherin
Motif
Other DBs
NCBI-ProteinID:
SOB57042
UniProt:
A0A2C8F3U9
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Position
DPRO:complement(165226..166242)
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AA seq
338 aa
AA seq
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MKILVTGGCGFIGTNFIRLMLQKHQDWSIINLDQLTYAGNRLNLLDLEENEPRYTFVQGD
IGDRELVMDLLSDHSIDAVINFAAESHVDRSINDPSPFVKTNVLGAQNLFECARQRNISR
FVHISTDEVYGSLGPEGQFVETTPLAPNSPYSASKAGADMMARAYFETYGFPILVTRCSN
NYGPYQFPEKLIPLMYMNAMADKSLPVYGDGQNVRDWIYVDDHCLGVELTLLKGKEGQAY
NFGGNAEETNLDVVKTLLSVVGKPESLITYVADRPGHDLRYAMDYSLAAEELGFAPTVDF
ETGLKKTIQWYKENQLWLDQVQSGEYRQFMDTWYEERS
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattcttgtcaccggcggctgcggttttattgggaccaattttatacgcctgatg
ctgcaaaagcaccaggactggtcaattatcaacctcgaccaactgacctacgcaggcaac
aggctcaatctgctggaccttgaagaaaatgagcctcgctacacctttgttcaaggtgac
attggggatcgtgaattggtgatggaccttctctccgaccactccattgatgccgttatc
aactttgcagcagaatcacacgtggatcgttccatcaacgatccgtcgcccttcgtcaaa
actaatgttcttggtgcgcagaatctttttgaatgcgcccgtcagcgcaacatcagccga
ttcgttcatatttccactgatgaagtatacggttcccttggaccggaagggcaatttgtc
gaaacgacaccacttgctcccaactcgccctactctgcgagcaaggccggtgcggacatg
atggcacgtgcctattttgagacctatggatttcccattctcgtaacacgctgctccaat
aactacggtccctaccagtttcccgaaaaactgattccgctcatgtacatgaatgccatg
gccgacaagtcactgcctgtatatggtgatggtcagaatgttcgcgactggatatatgtt
gatgaccattgccttggcgtagaactgaccctcctaaaaggaaaggaaggccaggcttac
aactttggcggcaacgctgaggaaaccaaccttgatgttgtgaaaacgctgctgagcgta
gtaggcaaacccgagtccctcatcacatatgttgctgatcgtccaggacatgaccttcgc
tacgccatggattactcactggcagccgaagagcttggtttcgccccaacagtcgacttt
gaaaccggcttgaaaaagaccatccagtggtacaaagagaatcagctttggttggaccag
gtacagagtggggaatatcgtcagttcatggacacatggtacgaggagcgttcttaa
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