Pseudodesulfovibrio profundus: DPRO_0205
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Entry
DPRO_0205 CDS
T05258
Symbol
fliA
Name
(GenBank) RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
pprf
Pseudodesulfovibrio profundus
Pathway
pprf02020
Two-component system
pprf02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pprf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
DPRO_0205 (fliA)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
DPRO_0205 (fliA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pprf03021
]
DPRO_0205 (fliA)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pprf02035
]
DPRO_0205 (fliA)
Transcription machinery [BR:
pprf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DPRO_0205 (fliA)
Bacterial motility proteins [BR:
pprf02035
]
Flagellar system
Flagellar assembly proteins
Stator
DPRO_0205 (fliA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r4_2
Sigma70_r2
Sigma70_r3
UPF0122
PhyR_sigma-like
HTH_15
DnaD_N
Cyclin_C
GerE
Motif
Other DBs
NCBI-ProteinID:
SOB57084
UniProt:
A0A2C8F3V7
LinkDB
All DBs
Position
DPRO:complement(198737..199522)
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AA seq
261 aa
AA seq
DB search
MAILNSSGKNSSSRNDPWRKLEQGDKSWNDFSARDREEIVRFYSPKIRILALRLKAKLPQ
SVELNELISAGSLGLLDALGKFNPELGIKFDTYSENRIKGAMLDELRRMDWFSRGLRQKV
KVIEDAQRHIEHETGAPATTEQLQEHTGMSEKEVQQGLEALHNQICLSLDSFHENVIGRK
HMTEDEPFQSTAFQEIVDKVANLIEELTPREKLVISLYYGEELNMKETAEVMDITEGRVS
QLHSQALKKLRKTFRARYESE
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atggcaatattaaattcttctggaaaaaactcctcttccaggaacgatccgtggcgtaag
ctggaacagggagataaaagctggaacgatttctcggctcgagaccgtgaggaaatcgtt
cgcttctactcgcccaaaatccggattctagcgctgcgactcaaagccaagctcccccaa
agcgttgaactcaacgagttgatcagcgcaggcagcctgggacttcttgatgcactcgga
aagttcaatcccgaacttggaatcaagtttgacacatactccgagaaccgcatcaaaggg
gcaatgcttgatgaattgcgtcggatggattggttttccagagggttacgtcaaaaggtc
aaagtcatcgaagatgcgcaacgacatattgagcatgaaacaggcgccccggccacgaca
gaacagctacaagagcacaccggaatgtctgaaaaagaggtccagcagggactggaagcc
ttgcacaatcaaatatgccttagcctggacagttttcatgaaaacgtgattggccgaaaa
cacatgaccgaagatgagccatttcagtctacagcctttcaagagattgttgacaaagta
gcgaatctcattgaggaattgacgccacgggaaaaattggtcatatctttatactacggc
gaggaactgaatatgaaagagactgctgaggttatggacataaccgaaggacgagtctca
caacttcactcccaagcccttaaaaaattaagaaaaacattcagagctcgctatgaaagc
gagtaa
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