Pseudodesulfovibrio profundus: DPRO_0749
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Entry
DPRO_0749 CDS
T05258
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pprf
Pseudodesulfovibrio profundus
Brite
KEGG Orthology (KO) [BR:
pprf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pprf03016
]
DPRO_0749 (truB)
Enzymes [BR:
pprf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
DPRO_0749 (truB)
Transfer RNA biogenesis [BR:
pprf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DPRO_0749 (truB)
Prokaryotic type
DPRO_0749 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
SOB57636
UniProt:
A0A2C8F550
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All DBs
Position
DPRO:753962..754900
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AA seq
312 aa
AA seq
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MGRKRKRSKEQCDGVLVLNKPSGPTSADCLNDIKHQLKQYKIGHAGTLDPLASGVLLVML
GHGTKLGPYLTGATKTYTGTFRLGMTTDTLDIQGETVSESEVNVTAEDVEREILYWKELT
EQEVPAYSAAKHKGKPLYALARAGEDVPVKIKPIVISHVEMLDVRLPEASFRVSCSAGTY
IRSLVHSLGKRMGCGAVLTSLNREESEPFGLDKAYELADVLEHPESFPDKVIPLRDTLPH
WPRFQLTEPLSGLVMNGTWLPVNDEPGEMLAGELGDQAMLLDHEGKPLALVEAKLQDNKP
KWSILRGLWGQD
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgggacgtaaaagaaagcgcagcaaagagcagtgcgatggagtcctggttctgaacaaa
ccgtcaggaccgacttctgctgattgtctcaacgacatcaagcaccagctcaagcaatac
aagatcggtcatgccggaacgctcgaccccttggcttcaggtgttttgttggtcatgctc
gggcacggtacaaagcttggtccgtatctcactggcgcaacaaaaacctataccggaaca
tttcgccttggaatgacgacggataccctcgatattcaaggggaaaccgtttcagaaagc
gaagtaaacgttactgccgaagatgtcgaacgtgaaattttatattggaaagagttgaca
gagcaggaagttccggcctattccgcagccaaacacaagggcaagcctttgtatgcctta
gcccgtgcgggcgaagacgtaccggtaaaaatcaagcccatagttatttctcatgtggaa
atgctggacgtacgattgccagaggcatcgttcagggtcagttgctccgccggcacttac
atacgctccctggtccacagcttggggaagcgaatggggtgcggcgctgtgctgaccagc
ctgaaccgcgaagagagtgaacctttcggactcgacaaggcttacgaactcgcggacgtt
ctggagcatccggaatcctttccggacaaggtgattcccttacgggatacccttcctcac
tggccccggtttcaattgactgaaccactgtcaggactcgtcatgaacgggacctggctg
ccggtcaacgatgaaccgggagaaatgctggcaggagaactcggcgatcaggccatgctg
cttgatcacgaaggaaaaccgctggcgctggtagaggcgaagcttcaggacaacaaaccc
aaatggtccattttacgtggcctgtggggacaggactga
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