Pseudodesulfovibrio profundus: DPRO_0752
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Entry
DPRO_0752 CDS
T05258
Symbol
pnp
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pprf
Pseudodesulfovibrio profundus
Pathway
pprf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pprf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DPRO_0752 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprf03019
]
DPRO_0752 (pnp)
03016 Transfer RNA biogenesis [BR:
pprf03016
]
DPRO_0752 (pnp)
Enzymes [BR:
pprf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
DPRO_0752 (pnp)
Messenger RNA biogenesis [BR:
pprf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
DPRO_0752 (pnp)
Transfer RNA biogenesis [BR:
pprf03016
]
Prokaryotic type
tRNA degradation factors
DPRO_0752 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
KH_1
S1
KH-I_KHDC4-BBP
KH_2
KH_NusA_2nd
HFX_2341_N
Motif
Other DBs
NCBI-ProteinID:
SOB57639
UniProt:
A0A2C8F504
LinkDB
All DBs
Position
DPRO:755492..757744
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AA seq
750 aa
AA seq
DB search
MLTPFDSTSVTANVGDIDITIETGKYARQASGAVTISSGNTTVLVTAVTQPLAVDRGFFP
LTCNYQEMAYAAGRVPGNYFRREGRPSEHETLVSRLIDRPIRPLFAEGFADEVQIIATVL
SADKHVNPDVLALTGASAACHISKMPFLGPIVGARVGYVNNEFVLYPSYKGIEEQSSLNL
VFAATRDAMVMVEGGAQFISEDIIADALAWGHEQVMPLFDIQDQLREKVGVPKLEVAAPE
QDQEIVEFLGDFITEDLEKALTTPEKMVRYAAKDAAKKKAQEAVAEKFPEDEAKLKAVGD
VIGDMTKKIVRERIVKEGKRIDGRDTTTVRPLSIETGLLQQTHGSVLFRRGETSALAVAT
LGSTRDEQRYDSLLGDATKRFMLHYNFPPYCVGEARMLRGTSRREVGHGALAERALSPVL
PSPEEFPFTIRVVSEIMESNGSSSMASVCGATLSLMDAGVPITEPVAGIAMGLCKENDEY
FILTDILGDEDALGDMDFKVAGTRDGITAIQMDIKIAGIPQDVLKKALHQAKDARIHILD
HMAEELETPRESLSELAPQMAVVHIDPEKIRSVIGPGGKNIKAITAETEADIDIEDSGKI
SIFAPTMASMEKAKEMVLYYDQKPEPGKNYLGTVRKVLEVGALVEILPGQEGMLHISQLD
FERVERVEDVVQLGQEVWVKCIALEPGGRIRLSRKAWLMEEAGQEVNLDDFKRPAPRGGD
RGDRGGRRDNRGGRDNRGGGRRDNRGGGRR
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgttgaccccctttgattcgaccagtgtcaccgcaaatgtcggcgacatcgacatcact
attgaaaccggtaaatacgcccgacaggcaagcggcgcagttaccatttcttccggcaat
acgaccgtactggtcactgccgttacccagccccttgccgttgatcgcggcttcttcccg
ctgacctgtaactatcaggaaatggcatacgccgccggtcgcgttccgggtaactacttc
cgtcgtgaaggacgtccttccgagcacgaaaccctggtttcccgcctcatcgaccgtcct
attcgtccgctcttcgcagaaggttttgccgacgaagtacagatcattgcaaccgttctg
tccgctgacaaacacgtcaatccggacgttctggcgctgactggtgcttccgcagcctgc
cacatctccaagatgcccttcctcggccccatcgttggtgcccgtgtcggatacgtgaac
aacgagtttgttctgtatccttcttataaaggtattgaagagcagtcttccctgaacctc
gtcttcgcggcaacccgcgacgccatggtcatggtagaaggtggcgctcagttcatctcc
gaagacatcattgccgatgctctggcctggggccatgagcaggtcatgccgctcttcgac
attcaggaccagcttcgcgagaaagtcggtgtacccaagctcgaagtcgctgcccccgag
caggatcaggaaatcgttgaatttctgggcgacttcatcaccgaagaccttgagaaagca
ctgaccacccctgagaagatggttcgttatgctgccaaggacgctgcaaagaaaaaggca
caggaagctgttgccgaaaaattccccgaagacgaagccaagctcaaagctgttggcgat
gtcatcggcgatatgaccaagaaaatcgttcgcgagcgcatcgtgaaagaaggcaagcgt
atcgatggccgcgacaccaccacggttcgcccgctgtccatcgaaaccggcctgctgcag
cagacccacggttccgtgctcttccgccgcggtgagacctctgctctggcagtcgccacc
ctcggctccactcgcgatgagcaacgctacgactccctgctgggcgatgctaccaagcgc
ttcatgctccattacaacttccccccatactgcgtgggtgaagctcgtatgctgcgcggc
acctcccgtcgtgaagtcggccacggtgccctggctgaacgcgctctgtccccggtactc
ccgagccccgaggaattcccgttcaccatccgtgttgtctccgagatcatggagtccaac
ggttcctcttccatggcttccgtatgcggcgccaccctgtccctgatggacgctggtgtc
cccatcaccgagccggttgccggtatcgccatgggcctgtgcaaggagaacgacgagtac
ttcatcctcaccgacatcctcggtgatgaagacgcactgggcgacatggacttcaaggtc
gccggtactcgcgatggcatcaccgccattcagatggacatcaagatcgccggtatccca
caggacgttctgaagaaggccctgcaccaggcaaaagacgcacgtatccacatcctcgac
cacatggccgaagaactggaaaccccgcgtgagtccctgtccgagctggctccgcagatg
gctgttgttcacattgatcccgaaaagatccgttctgtcatcggacccggtggcaagaac
atcaaggcgatcactgctgagaccgaagccgacatcgatatcgaagattccggtaaaatc
tccatcttcgccccgaccatggcatccatggaaaaggccaaggaaatggtcctctactac
gaccagaagcccgaaccgggcaagaactacctcggcaccgtccgtaaagttctcgaagtg
ggcgcccttgtcgagattctccccggccaggaaggcatgctccacatttcccagctcgac
ttcgagcgcgtggaacgtgtggaagacgtggtccagctcggccaggaagtatgggtcaag
tgcatcgcactggaacccggcggacgcatccgtctctcccgcaaggcatggctcatggaa
gaagccggtcaggaagtcaacctggacgacttcaagcgccctgcacctcgcggtggtgac
cgtggtgaccgcggtggtcgccgtgacaatcgcggtggacgcgacaatcgtggcggtggt
cgccgcgacaaccgtggcggcggacgtcgctag
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