Pseudodesulfovibrio profundus: DPRO_0764
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Entry
DPRO_0764 CDS
T05258
Symbol
gcvPB
Name
(GenBank) putative glycine dehydrogenase (decarboxylating) subunit 2
KO
K00283
glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:
1.4.4.2
]
Organism
pprf
Pseudodesulfovibrio profundus
Pathway
pprf00260
Glycine, serine and threonine metabolism
pprf00630
Glyoxylate and dicarboxylate metabolism
pprf00670
One carbon pool by folate
pprf00785
Lipoic acid metabolism
pprf01100
Metabolic pathways
pprf01110
Biosynthesis of secondary metabolites
pprf01200
Carbon metabolism
Module
pprf_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
pprf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
DPRO_0764 (gcvPB)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
DPRO_0764 (gcvPB)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
DPRO_0764 (gcvPB)
00670 One carbon pool by folate
DPRO_0764 (gcvPB)
Enzymes [BR:
pprf01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
DPRO_0764 (gcvPB)
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GFIT
Motif
Pfam:
GcvP2_C
GDC-P
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
SOB57651
UniProt:
A0A2C8F4X5
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All DBs
Position
DPRO:770016..771458
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AA seq
480 aa
AA seq
DB search
MKTIFEKSVAGREGCWPCEGMAEEAYIPADLLRDGDIGLPSASELDVVRHFTKLSQRNFG
VDGNFYPLGSCTMKYNPKFTESVAGLPGFTRLHPVLPQLQGAGGMCQGALEVMYETENLL
SEITGMAAYTLHPMAGAHGELTGVMLMAAYHKDKGNKKTKIIVPDSAHGTNPASAAIAGY
DVVTVESVDGIVDPGALAEVLDDEVAGMMMTCPNTLGLFEKNLPEVVRMLREVDALLYYD
GANLNAIMGKMRVGDAGFDIVHLNLHKTFATPHGGGGPGSGPVGVSEKLVDFLPISRVAK
QEDGQFFLDYNYPKSIGYVAPFYGNFGVYLKAYAYILRLGGVGLTRATENAVLAANYMRK
RLSDHFDIPYDRICMHEFVASASPQAKNGVRALDIAKALLDKGHHAPTVYFPLIVPEALM
VEPTETENKETLDGFIDDLIAIAEQAKTDPEAIKAAPVTLPVTRLDETHAARAMELTDDL
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccatctttgaaaaatccgtagccggacgcgaaggctgctggccctgcgaaggc
atggccgaagaagcatacattcctgctgacctgttgcgcgacggcgacatcggactgcca
tccgccagcgagctggatgtggttcgccatttcaccaagctctcacagcgcaactttggt
gtggatggcaacttctacccgctgggttcctgtaccatgaagtacaatcccaagttcacc
gagtccgttgccggactgcccgggttcacccgcctgcacccggtgctgccgcagcttcag
ggagccggaggcatgtgtcagggcgcgcttgaggtcatgtacgaaaccgagaatctgctc
agcgaaatcaccggaatggctgcatacaccctgcatcccatggccggtgcgcacggtgag
ctgaccggtgtcatgctcatggctgcctaccacaaggacaagggcaacaagaaaaccaag
atcatcgttccggactccgcacacggcaccaaccccgcatccgctgccattgccggatat
gatgtggtcacggtcgaatccgtggacggcattgtcgatccgggcgccctcgcggaagtg
ctggatgatgaagtcgccggtatgatgatgacctgtcccaatacgttgggactgttcgag
aagaatctgcctgaagttgtccgaatgctgcgagaagtcgacgctctgctctattacgac
ggcgcgaatctcaacgccatcatgggcaaaatgcgagtcggcgacgccggtttcgacatc
gtacacctgaacctgcacaaaacctttgccacaccacacggtggaggcggtcccggttcc
gggccggtcggcgtcagcgaaaagctcgtcgacttcctgcccatctcccgtgtggccaag
caggaagacggacagttcttccttgactacaactatccgaaatccatcggatatgttgca
cctttctatggcaacttcggcgtctacctcaaggcatacgcctacatcctgcgtcttggc
ggcgttggcctgacccgcgcaaccgaaaacgcggttctggctgccaactacatgcggaaa
cgtttgtctgatcacttcgatatcccctacgaccgcatctgcatgcacgaattcgttgca
tcggcctcaccacaggccaaaaacggcgttcgtgcgctggatatcgccaaagcgcttctg
gacaaggggcaccacgcccccaccgtatacttcccgctgatcgtgcccgaagcactcatg
gtggagccgactgaaacggaaaacaaagaaacgctggacgggttcatcgacgacctgatc
gccatcgcggagcaggccaagaccgaccccgaggccatcaaggcggcccctgtaacgctg
cctgtcacccgtctggatgaaacacatgctgcacgcgcaatggagttaactgatgattta
tga
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