Pseudodesulfovibrio profundus: DPRO_0845
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Entry
DPRO_0845 CDS
T05258
Name
(GenBank) Metal dependent phosphohydrolase
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
pprf
Pseudodesulfovibrio profundus
Brite
KEGG Orthology (KO) [BR:
pprf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprf03019
]
DPRO_0845
Messenger RNA biogenesis [BR:
pprf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DPRO_0845
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Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Cas3_HD
HD_3
HDOD
NuBaID_C
Motif
Other DBs
NCBI-ProteinID:
SOB57735
UniProt:
A0A2C8F5S3
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All DBs
Position
DPRO:850070..851098
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AA seq
342 aa
AA seq
DB search
MTQKSQYIQDLTPGIPVNDYFMLSAASLAQSRNGPYWNLTFQDATGKVDGKIWSPKSQEY
PSLVAGQITRVQGFVESYRDKNQLKVDHLELVSADQPSIDLADYLPTSKTPPTELLEQVE
DLITEHMKYAPWKSFCRKVLSNDDIRNRLLTAPGAKTVHHAYIGGLLEHSLRVAQSCMAI
CNVYRDLDRQTLLAGAIFHDLGKAWELTGGLANDYTDEGRLLGHIQLGQEKLEPFLKRSK
SLDDGLKLHFRHLITSHHGEHEFGSPVRPNTPEAFVLHFADNMDAKLNIIDQAYEDMEKT
DQQWSPYLRFLERSVFRPTVTPDMGKKKNDKPENQCLLPLKA
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
gtgacccaaaagtcgcaatatattcaagacctgacccccggcataccggttaatgactat
ttcatgctgagcgcagcgagtctggctcagtcacgaaacggcccgtactggaacctgacg
tttcaagatgcgaccggcaaagtggatggtaagatatggagccctaaaagccaagaatac
ccttcactcgttgcgggacaaataactcgtgttcaaggatttgtcgaaagctacagggac
aagaatcaactcaaagttgatcaccttgaacttgtcagtgcagaccagccttcaatagat
ttggccgattaccttccgacatcaaaaacaccgcctactgagttgctagaacaagtcgaa
gacttgattacggagcatatgaaatacgctccatggaagtcgttctgccgcaaagtactg
agcaacgatgatatcagaaatcggctgctgacggctcctggtgccaaaacagtccaccat
gcatatatcggtggattactagaacattcgctccgcgtggctcagtcgtgcatggcaata
tgcaatgtataccgagatctggatcgacagacactgttggccggagcaatctttcatgac
cttggcaaagcgtgggaactcaccggtggtcttgcaaacgactacaccgacgaaggcaga
cttctcggtcacatacaactcggtcaggaaaaactggagccatttctcaagcgatccaaa
tcccttgatgatggactcaagttgcattttcggcatttgatcaccagccatcatggtgaa
cacgagttcggctcccctgtgcgccccaatacgcccgaagcatttgttcttcattttgct
gacaacatggacgccaaactcaacattatcgatcaggcgtacgaggatatggaaaaaact
gatcagcaatggtcgccttacctcagattcctcgaacgaagcgtcttccgtccgaccgtg
acccccgatatggggaaaaagaaaaacgacaagccggagaaccaatgtttattacctttg
aaggcatag
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