Pseudodesulfovibrio profundus: DPRO_0864
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Entry
DPRO_0864 CDS
T05258
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pprf
Pseudodesulfovibrio profundus
Pathway
pprf03420
Nucleotide excision repair
pprf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pprf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DPRO_0864
03430 Mismatch repair
DPRO_0864
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pprf03400
]
DPRO_0864
Enzymes [BR:
pprf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DPRO_0864
DNA repair and recombination proteins [BR:
pprf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DPRO_0864
MMR (mismatch excision repair)
Other MMR factors
DPRO_0864
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
DEAD
AAA_12
AAA_11
AAA_22
ResIII
HHH_5
Motif
Other DBs
NCBI-ProteinID:
SOB57754
UniProt:
A0A2C8F577
LinkDB
All DBs
Position
DPRO:869433..871571
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AA seq
712 aa
AA seq
DB search
MPIDFENELNEAQREAVQTTEGPVLVIAGAGSGKTRTIVYRLAHLVEQGVDPAQILLLTF
TRKAAQEMLNRAETILGRPLTGTSGGTFHSFAYATLRRNAADIGFENGFTLMDRADSENI
CKEVKDNLKLGKGDRSYPKKGTLLDMITKSRNKEAPIEVIMEKEAYHLSPYLDDMNEIAT
GYAHFKKQHALVDYDDLLFLLDKLLEENEPLRNQLQARYRYIMVDEYQDTNLVQARIVKQ
LAGKNGNVMAVGDDAQSIYAFRGANVQNILDFPKIFDGGKVIRLEQNYRSVQPILDLTNE
ILAGAATKFDKNLYSDLKSDKLPEVVYPLSDQTQARLVVDQILELKKKYLLHDIAVLFRA
GYQSFPLEVALTRIGIDYQKYGGIRFHEAAHVKDVLSYLRLVLNPHDLLAWQRALDHIKG
VGPKTVAKIYQAIHSGDEKYMAKITKKHEPLRELLNELNGLRSIERRPAALLERISAFYQ
PILIEKYPDDYPKRQAGLEQLNQIAASYSDMEQFLGDLSLDGDPEDEKRKENAVVLSTVH
SAKGLEWSAVIIIDLVEDRFPSRKAMQRAEDLEEERRLMYVACTRAKECLKMMVPSSVYN
RASGMSDPTLPSPFILELPNNVFDKLNESYGGGLEKKRHAPSNSYTSPSYSKPSSTTQNH
AAAKPDPKQLGFCKHKIFGKGKIIARPEPNKYKVNFPGFGIKTIIGDYLELL
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgcctatagattttgagaacgaactgaacgaagcacagcgtgaggcagttcagacaaca
gaaggaccggttctggtaattgccggtgcaggatcgggtaagacaaggacaatcgtctat
agattggcacaccttgttgaacaaggagtagaccctgcacagattctgctgctcaccttc
acgcgaaaagctgctcaggaaatgctcaatcgcgctgaaacgattcttggtcgtccactg
acaggaacaagcggtggaacattccactcgtttgcctacgccacacttcgacgaaatgcc
gccgacatcgggttcgagaatggcttcaccctcatggatcgcgccgacagcgagaacatt
tgcaaggaagtcaaagacaacctgaagcttggcaagggtgatcgctcctaccccaaaaaa
gggacccttctcgacatgatcaccaaatcgcgaaacaaggaagcccctattgaagtgatc
atggaaaaagaggcgtaccacttgagcccttaccttgatgacatgaacgaaattgcgaca
ggttacgcccatttcaaaaagcagcatgccttggtcgattatgacgacctgctcttcctt
ctggataaactccttgaagaaaatgaaccgcttcgtaaccaattgcaggctcgctaccgt
tatatcatggtggatgagtaccaggacaccaaccttgttcaggcgcgtatagtcaaacaa
ctggctgggaagaacggcaatgtcatggctgtcggtgatgatgcgcagtcgatctatgcg
ttccgaggtgccaacgttcaaaacatactggatttccccaaaattttcgatggtggcaaa
gtgattcgtctggagcagaattatcgttctgtgcaacctattctggatcttacgaacgag
atacttgcaggggcagcaaccaaatttgacaagaatctttattccgacctcaaaagcgac
aagctgcccgaggtcgtctaccccttgagtgaccaaacccaggcacgactggtcgttgat
caaatcctggagttaaagaaaaagtacctgctacatgatattgcagtcctgtttagagcc
ggataccagtcattcccacttgaggtggccctcacccgcatagggatcgattatcaaaaa
tacggaggcatccgctttcatgaagcagcccatgtcaaagatgttctctcctacctgcga
cttgtccttaacccacatgatctgcttgcttggcaacgagccttggatcacatcaagggc
gttggaccgaaaacagtcgccaaaatttatcaggccattcattccggcgatgaaaagtat
atggccaagattacaaagaaacatgaaccgcttcgagaattgctcaacgagctgaacgga
cttcggtccatcgaacgccgtcccgcagctcttcttgaacggatatccgcattctatcag
cccatattgattgaaaaatatcctgatgattatccaaagcgacaagcgggtctcgaacaa
ttgaatcagatcgcggcaagctattccgatatggagcaattcctcggtgacctcagtctc
gacggcgacccggaagacgaaaaacgcaaagaaaacgcagtagttttgtccaccgtccat
tcagccaaaggactggaatggagcgctgtaatcattattgaccttgtcgaggaccgcttc
ccgtcacgcaaggccatgcagcgagcagaagacctcgaagaagaacgaagattgatgtat
gttgcatgtaccagagccaaggaatgcctgaaaatgatggttccaagctctgtttacaac
agggcaagcggcatgtctgatccgaccctgccaagccccttcattctcgaactgcccaac
aacgtgttcgacaagttgaacgaatcttatggtggtgggctggagaagaagaggcatgcc
ccctcaaactcgtacacatctccctcttattcgaagccatccagtacgacacaaaaccat
gcagccgcgaaacccgaccccaaacaactcggattctgcaagcataagattttcggcaaa
ggtaagatcatagcccgacctgaaccgaacaagtacaaagtcaactttcccggttttggc
atcaaaaccatcattggcgactacctcgaactactctaa
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