Pseudodesulfovibrio profundus: DPRO_0971
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Entry
DPRO_0971 CDS
T05258
Name
(GenBank) conserved protein of unknown function
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
pprf
Pseudodesulfovibrio profundus
Brite
KEGG Orthology (KO) [BR:
pprf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pprf03400
]
DPRO_0971
Enzymes [BR:
pprf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DPRO_0971
DNA repair and recombination proteins [BR:
pprf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
DPRO_0971
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
SOB57858
UniProt:
A0A2C8F604
LinkDB
All DBs
Position
DPRO:975866..978754
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AA seq
962 aa
AA seq
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MNPIHLIPWQQDFISALGELLLDRPDFSQCTVVLPHNRPRLYLKEYFKNNGGFNGPVMLP
RMVSISDFVTEIRRDLTDASVMNAHQLDLVELLYGIVTELRQSGKGLLARLPELNREDFL
PWGIRLAKLMDDLLRQDIEPEDLTYLEGEVAPYAVGLLEQISTIHRLYILRLSEKNWTTP
GLDWRYITSNINDAAEMQAGKSIIAAGFYALSGTENIFFQRLWSDGILHPILHSDPALAR
KETSHWAVSEHKAWLRRWRASAVIPETVVEREHQPAIRFCEGFDRHSQLAALSDDLEGSQ
LLTDSAVILPDEGALMPVMHHLPEADINISMGYPLARTSLARLIETILQLQENRLDDGRY
YWRDIVDLIRHPYLRLLGPEDKPLRKVFHVWEAEIRIGERHISPLAYMPPYGDTVLEGVD
EGTTEALRKSILDHCLMAFESVSNLETLGNALNSLAAMLHEHGHQLWLDYLVDAECLFRL
TTSIIPELRSVENRTEPYSQSTLFALLRRLLSQERVSFEPEPLGGLQVMGVLETRLLHFR
RLFILDAVEERLPGTDAYDPLLPDPLRKLLGLPDARERDNVSGYNFYRLLMGADEAVIYY
QNGIQPGLLDSKSSRSRFVEQLLWEREQKEQRIIEPGDPLIRTMTFSVGALVNDSKAISI
TSTIRDQLHALLVDQGLSPSRIDRYMHCPKQFYYSDLCKVRPIKQVDEDGDRSEFGSLLH
DVLREFHEPFIGRKVDFKHVDSASLLSLFDERLKSSSFYRQLALDTRMALRKTGHFRLEQ
YLDSLEPTTLLGLEDQLRTALFVDGKDIPINGQLDRIEERDEGVVILDYKTGGGVLPRKN
MWEDMELWDRVHDFKTEENDVDLLADIAQSVQSVQLPLYMYLYLNEKNQTPHDAGLIKLA
ENGKSEFAFGPKWTDQERHEAIESMTPTLISCIIRHMMTTDQFSPNPGKRCEWCDFKIPC
GQ
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atgaaccccattcacctcatcccttggcaacaggacttcattagtgccctcggcgagttg
ctgctggaccgtccagacttcagtcaatgcaccgttgtgctacctcacaaccgacctcgc
ctctacctgaaggaatatttcaagaacaatggcggattcaatggtcccgtcatgctcccg
cgcatggtatccatatccgactttgtgacggaaatccgaagggatttaacagatgcttcg
gtcatgaacgcccatcaactcgatcttgtcgagctactctacggtatcgtgactgaatta
cgccagtcagggaaaggactgctggcccgcctgcccgaactcaaccgagaggacttcctc
ccttggggcattcgtcttgccaaactcatggacgatcttctgagacaggacatcgaaccg
gaagaccttacctatctcgaaggcgaagttgccccgtatgcggttggacttctggagcaa
ataagcactatccaccggctgtatattttacgactctcggaaaagaactggacgacaccg
gggctggactggcgttatatcaccagcaacatcaatgacgctgcagaaatgcaggcaggt
aagtccatcatcgctgccggtttctacgctctaagcggtaccgaaaacatctttttccaa
cgattgtggtctgatgggatactccatccgatccttcactccgatccggcccttgccaga
aaagagacaagccactgggccgtatcagagcacaaggcgtggctccgtcgctggagagcc
tctgccgtcatccctgagacagtggttgagcgggagcaccaacccgccattcgattctgt
gaagggttcgatcgccattcccaacttgcggccctgtcggacgaccttgaaggatcgcaa
ctactgacggacagtgccgtcatccttccggacgaaggcgcactcatgccggtcatgcat
cacctgcccgaggcagacatcaacatttccatgggatacccacttgcacggacctccctt
gccagattgatcgaaacgatcctgcaactccaggaaaacagattggatgacggccgctat
tactggcgtgatattgtcgatctcatccgccacccctaccttcggcttttgggaccggaa
gacaagccactgcgcaaggtttttcatgtttgggaagcagagattcgcataggagaacga
cacatttcgccactggcctacatgccaccgtatggcgacacggttctggaaggggttgat
gaagggactaccgaagcccttcgcaagagtattctcgatcactgcctcatggcatttgag
tctgtctccaatcttgagacactgggcaatgcgctgaattcgcttgccgccatgctccat
gagcacgggcatcaattatggttggattatctggtcgatgcagaatgcctcttcagactc
acgacctcaatcattccagaactcagaagcgtggaaaatcggacggaaccatacagtcag
tccaccctgttcgcactgctcagaagactcctttctcaagagagagtatcattcgagccc
gagccgctgggaggattgcaggtaatgggtgttctcgaaacccgcctgctgcattttcgc
cggttgttcattctcgatgccgtggaagaacgcctgccgggaacagatgcctacgacccc
ctacttccagacccgctccgcaagctgcttggcctgcctgatgccagggaacgggacaat
gtttcaggatacaacttttaccgtttgctcatgggggcggatgaggcggtcatctattat
cagaacggtatccagccgggactgcttgattccaaatcatcacgcagtcgattcgttgaa
cagttgctttgggaacgggagcaaaaagaacaacgaatcattgaacccggtgatccattg
atccgaactatgaccttctctgttggggcgctggtgaatgacagcaaagcgatatccatc
acaagcaccatcagagatcagttgcatgcccttttggtcgatcaaggcctttcgccttct
cgaatagaccgatacatgcactgccccaagcaattctactattccgacctgtgcaaagtc
cgccccataaaacaggttgatgaagacggcgatcgaagcgagttcggttcactgctgcac
gatgttctccgtgaatttcacgagccgttcattgggcgcaaggtggacttcaagcatgtc
gactccgcaagcctgctctccttgtttgacgagagacttaaatcgagcagcttttacaga
cagttggcccttgatacaagaatggcgctacgtaaaacaggccacttccggcttgaacaa
tacctggacagcctggagccgaccactctgcttgggctggaagaccaactgcgaacagcg
ttattcgttgatggcaaagatattcccattaacgggcaactcgaccgcattgaagagcgc
gatgaaggtgtggtcatcctggactacaagaccggcggcggagtcctgcctcgaaagaat
atgtgggaagacatggagctatgggatcgagtccatgacttcaaaacagaggaaaatgat
gttgatctgttggcggatatcgcccaatcagttcaatcagtccagcttcctttgtatatg
tatctgtatctcaatgagaaaaaccagacaccacatgatgcagggttgatcaaattagca
gagaacgggaaatccgaatttgcattcggcccgaaatggacggaccaggaacgccatgaa
gccattgagtccatgacccccactctcattagctgcatcattcggcacatgatgactacg
gatcaattttcaccaaatccaggaaagcgctgcgaatggtgcgatttcaaaatcccctgc
ggacaatag
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