Pseudodesulfovibrio profundus: DPRO_1108
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Entry
DPRO_1108 CDS
T05258
Symbol
potD
Name
(GenBank) Extracellular solute-binding protein family 1
KO
K11069
spermidine/putrescine transport system substrate-binding protein
Organism
pprf
Pseudodesulfovibrio profundus
Pathway
pprf02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pprf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
DPRO_1108 (potD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pprf02000
]
DPRO_1108 (potD)
Transporters [BR:
pprf02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Spermidine/putrescine transporter
DPRO_1108 (potD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
SBP_bac_11
ZnuA
4HFCP_synth
Motif
Other DBs
NCBI-ProteinID:
SOB57993
UniProt:
A0A2C8F831
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All DBs
Position
DPRO:complement(1127771..1128829)
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AA seq
352 aa
AA seq
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MKKIVVFALLSLFVMTGAAQAETLKLLTWKGYAPQKLIDAFEKETGIDVEVTFSNNEEMI
AKLRATRGAGFDLAQPSQDRIASVQKKFNLYQPLDYSKIDSSLFIPSMLEAVKKNTRVGS
DSYAVPFCWGTSGLIVNSDKAAEADSFKALIDPKYKGRVSYRLKRPTLIAMGFALGYDPF
ALYDDPKAYKEMLDKIADAMIEAKPVVKNYWANGDSLLESMRSEEVYVAMAWDAGGWKLH
GDNKAIDFKAPKEGALGWIDTFTIPSKAKNVDAAYKWINFIMKPENAGYFSSQEKYATAS
QGALKYTDEAVAANFDRSFPQATIDNIKWYPPVPAKLESMEGKILDKIKAAQ
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaattgttgtattcgctctactgtccctgttcgtcatgactggtgcggcccag
gcggaaacgttgaaactgttaacctggaaggggtatgctcctcagaaattgatcgatgca
tttgaaaaggaaaccggcatcgatgtggaagtcacgttttccaataacgaggagatgatc
gccaagctccgggctacccgcggtgccgggttcgacttggctcaaccatcccaggacagg
atcgcttctgttcaaaagaaattcaatctctatcaacccctggactactccaaaatagac
agctccctgttcatcccgtccatgcttgaggcggtcaaaaagaatactcgcgtgggcagt
gattcctatgcggtaccgttctgctggggaacctccggcctcatcgtcaatagcgacaag
gctgccgaagctgattccttcaaggcgctgattgatcccaaatacaaaggtcgtgtgagc
taccgtctgaaacggcccacgctgatcgccatgggctttgctctggggtatgacccgttc
gcactgtatgacgaccctaaagcctacaaagagatgctcgacaagattgcggatgcaatg
atcgaagccaagcctgtggtgaagaattactgggctaacggcgattcgctgctggaatcc
atgcgctcggaagaggtttacgttgccatggcatgggatgccggtggatggaagctgcat
ggcgataacaaggcaattgacttcaaggctcccaaagagggtgctctcggctggatcgat
acgttcaccattccctccaaggccaagaatgtggatgccgcctacaagtggatcaacttc
atcatgaagcctgaaaacgccgggtatttctcttctcaggaaaagtacgccacggcatcc
cagggcgctctgaagtacacggatgaagctgtggccgccaacttcgatcgatccttcccg
caggccaccatcgataatatcaaatggtatccgccggttcctgccaagctggaaagcatg
gaaggtaaaatcctggataagatcaaggccgcccaatag
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