Pseudodesulfovibrio profundus: DPRO_1300
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Entry
DPRO_1300 CDS
T05258
Symbol
oppD
Name
(GenBank) oligopeptide transporter subunit; ATP-binding component of ABC superfamily
KO
K02031
peptide/nickel transport system ATP-binding protein
Organism
pprf
Pseudodesulfovibrio profundus
Pathway
pprf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pprf00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DPRO_1300 (oppD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pprf02000
]
DPRO_1300 (oppD)
Transporters [BR:
pprf02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
DPRO_1300 (oppD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
ICE2
Motif
Other DBs
NCBI-ProteinID:
SOB58189
UniProt:
A0A2C8F6K2
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All DBs
Position
DPRO:complement(1315732..1316703)
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AA seq
323 aa
AA seq
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MSAPLLDIKDLQTNFYTRAGVVKAVNNISLTINKGEVIGIVGESGSGKSVTGFSIMGLVD
QPGRIAGGSIKFKGRELVGQSEAEWRAFRGNEVAMIFQDPMMTLNPVLRIDTQMIEAIRA
HEKVSRDEARRRSIEALAMVGIPSPEERIKAYPHQFSGGMRQRVAIATGLLNNPDLIIAD
EPTTALDVTIQAQILSEMQKLCKKTDMALMWITHDLTVIAGLAHRVAVMYAGTIIEEGPV
QDVLDDPQHPYTEGLIGSVPSRNRRGEPLYQIPGMTPSLINLPEGCPFRMRCPRSSDVCL
QEPPVTVREDGRKYRCFHPGKQS
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcaccacttctcgatatcaaggatctccagaccaatttctacacccgtgccggt
gtggtcaaagcggtcaacaatatatcccttaccatcaacaaaggtgaagtcatcggcatt
gtcggtgagtccggctcgggcaaatccgttaccggcttctccatcatggggctggtggac
cagcccggcaggattgccggcggttccatcaagttcaaggggcgcgagctggtaggccag
tccgaggccgagtggcgtgcgtttcgtggtaacgaagttgccatgatctttcaggacccc
atgatgaccctcaatccggtgttgcgaatcgatacgcagatgatcgaagcaatccgcgcc
cacgagaaggtctcccgcgacgaagcgcgcaggcgatcaatcgaggcgctggccatggtc
ggtatcccgtccccggaagagcgcatcaaggcgtatccgcatcagttctccggcggtatg
cggcagcgtgtggccattgccaccggactgctcaacaacccggatctgatcatcgccgat
gaaccgacaaccgcccttgatgtgaccattcaggcccagatcctgtccgagatgcagaag
ctctgcaagaagacggatatggcgctcatgtggatcacccatgacctgaccgtcattgcc
ggtctggcccatcgtgtggccgtcatgtacgccggaaccatcattgaggaaggtccggtg
caggatgtgctcgatgatccgcagcatccgtatacggaagggctgatcgggtcggttccc
agccgcaacaggcgcggtgaaccgctgtatcagattccgggcatgactccctcgctgatc
aacctgccggaagggtgtccgttccgcatgcgctgtccgcgttcttcggatgtgtgcctt
caggaaccgccggttacggtcagggaagacggacgaaaatatcgctgcttccatcccggc
aaacaatcgtaa
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