Pseudodesulfovibrio profundus: DPRO_1309
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Entry
DPRO_1309 CDS
T05258
Name
(GenBank) ABC transporter related
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
pprf
Pseudodesulfovibrio profundus
Pathway
pprf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pprf00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DPRO_1309
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pprf02000
]
DPRO_1309
Transporters [BR:
pprf02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
DPRO_1309
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
TOBE_2
SMC_N
RsgA_GTPase
AAA_29
AAA_22
AAA
AAA_23
AAA_25
AAA_15
SbcC_Walker_B
NB-ARC
AAA_28
nSTAND_NTPase5
ATP-synt_ab
NACHT
ORC-CDC6-like
Motif
Other DBs
NCBI-ProteinID:
SOB58199
UniProt:
A0A2C8F847
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All DBs
Position
DPRO:1324110..1325057
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AA seq
315 aa
AA seq
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MFLRAEKINKSFNGSPILHDIDFTVDKGSVTSFIGPSGVGKTTLLKMIAGLESPDSGHFA
FGEPPSREHPVILVFQDYLLFPNLTVFNNVAFGLRARKIKKAEIHSRVMTLLEHFQLAGK
SDEYPASLSAGQQQRVALARAMVVNPAILLLDEPFANLDRNLKMRTAEFIRDTQQEFGVT
TICVTHDQDEAFLMSDDIGVILNGKLAQFASARDVYAHPASFEVAEFLGPVNTLTEPDAA
LLGIQIRDGGYFVRPENLSIRPDDNGSGIIRRAIFAGRTNKYEVDWKGTRLTVISGGVDI
REGQRVHIQYQPKEK
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgtttcttcgggcagaaaagataaacaaatccttcaacggctctcccatcctgcatgat
atcgacttcacggtggataaagggtcggtcacgtcattcatcggaccgtccggtgtcggc
aagaccaccctgctcaaaatgattgccgggttggagtctcctgacagcggccattttgcc
tttggcgaacctcccagtcgggaacatccggtcattttggtctttcaggactatctgctt
ttcccgaatctgacggtgttcaacaacgtagccttcggccttcgggccagaaagatcaaa
aaggctgaaattcactcccgggtcatgaccctgctggagcacttccagttggcaggcaaa
tcggatgaatatcccgctagcctgtcagcaggacaacagcaacgcgtggcccttgcccgg
gccatggtcgtcaatccggccattcttctgctcgatgaaccgttcgccaaccttgaccgc
aatctcaagatgcgcacagccgagttcattcgggatacgcaacaggaattcggtgtgacc
acgatttgcgtgacccatgatcaggatgaggcgtttctgatgtctgacgatattggagtc
atcctgaacggcaagctggcgcaattcgcctcggcccgggatgtatacgcacatccggca
tcctttgaagtggccgaattcctcggtccggtgaacactcttaccgagccggatgctgct
ctgctgggtattcaaatacgggatggcggctatttcgtccgcccggaaaacctgtccatc
cggcccgatgacaatggcagcggcatcatccgccgggccatctttgcagggcgaaccaac
aaatatgaagtcgattggaaaggaacgcgtctgaccgtcatcagcgggggggtcgacatc
cgcgagggacagcgcgtgcatatacagtatcaacccaaggagaaatag
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