KEGG   Pseudodesulfovibrio profundus: DPRO_1309
Entry
DPRO_1309         CDS       T05258                                 
Name
(GenBank) ABC transporter related
  KO
K02052  putative spermidine/putrescine transport system ATP-binding protein
Organism
pprf  Pseudodesulfovibrio profundus
Pathway
pprf02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:pprf00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    DPRO_1309
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:pprf02000]
    DPRO_1309
Transporters [BR:pprf02000]
 ABC transporters, prokaryotic type
  Mineral and organic ion transporters
   Putative spermidine/putrescine transporter
    DPRO_1309
SSDB
Motif
Pfam: ABC_tran AAA_21 TOBE_2 SMC_N RsgA_GTPase AAA_29 AAA_22 AAA AAA_23 AAA_25 AAA_15 SbcC_Walker_B NB-ARC AAA_28 nSTAND_NTPase5 ATP-synt_ab NACHT ORC-CDC6-like
Other DBs
NCBI-ProteinID: SOB58199
UniProt: A0A2C8F847
LinkDB
Position
DPRO:1324110..1325057
AA seq 315 aa
MFLRAEKINKSFNGSPILHDIDFTVDKGSVTSFIGPSGVGKTTLLKMIAGLESPDSGHFA
FGEPPSREHPVILVFQDYLLFPNLTVFNNVAFGLRARKIKKAEIHSRVMTLLEHFQLAGK
SDEYPASLSAGQQQRVALARAMVVNPAILLLDEPFANLDRNLKMRTAEFIRDTQQEFGVT
TICVTHDQDEAFLMSDDIGVILNGKLAQFASARDVYAHPASFEVAEFLGPVNTLTEPDAA
LLGIQIRDGGYFVRPENLSIRPDDNGSGIIRRAIFAGRTNKYEVDWKGTRLTVISGGVDI
REGQRVHIQYQPKEK
NT seq 948 nt   +upstreamnt  +downstreamnt
atgtttcttcgggcagaaaagataaacaaatccttcaacggctctcccatcctgcatgat
atcgacttcacggtggataaagggtcggtcacgtcattcatcggaccgtccggtgtcggc
aagaccaccctgctcaaaatgattgccgggttggagtctcctgacagcggccattttgcc
tttggcgaacctcccagtcgggaacatccggtcattttggtctttcaggactatctgctt
ttcccgaatctgacggtgttcaacaacgtagccttcggccttcgggccagaaagatcaaa
aaggctgaaattcactcccgggtcatgaccctgctggagcacttccagttggcaggcaaa
tcggatgaatatcccgctagcctgtcagcaggacaacagcaacgcgtggcccttgcccgg
gccatggtcgtcaatccggccattcttctgctcgatgaaccgttcgccaaccttgaccgc
aatctcaagatgcgcacagccgagttcattcgggatacgcaacaggaattcggtgtgacc
acgatttgcgtgacccatgatcaggatgaggcgtttctgatgtctgacgatattggagtc
atcctgaacggcaagctggcgcaattcgcctcggcccgggatgtatacgcacatccggca
tcctttgaagtggccgaattcctcggtccggtgaacactcttaccgagccggatgctgct
ctgctgggtattcaaatacgggatggcggctatttcgtccgcccggaaaacctgtccatc
cggcccgatgacaatggcagcggcatcatccgccgggccatctttgcagggcgaaccaac
aaatatgaagtcgattggaaaggaacgcgtctgaccgtcatcagcgggggggtcgacatc
cgcgagggacagcgcgtgcatatacagtatcaacccaaggagaaatag

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