Pseudodesulfovibrio profundus: DPRO_1676
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Entry
DPRO_1676 CDS
T05258
Name
(GenBank) Lytic transglycosylase catalytic
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
pprf
Pseudodesulfovibrio profundus
Brite
KEGG Orthology (KO) [BR:
pprf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pprf01011
]
DPRO_1676
Enzymes [BR:
pprf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
DPRO_1676
Peptidoglycan biosynthesis and degradation proteins [BR:
pprf01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
DPRO_1676
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Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM1_NFP_LYK
LysM_RLK
LysM2_CERK1_LYK3_4_5
DUF7060
SLT_2
LtuA
Motif
Other DBs
NCBI-ProteinID:
SOB58576
UniProt:
A0A2C8F7G5
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All DBs
Position
DPRO:complement(1716226..1717836)
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AA seq
536 aa
AA seq
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MQISKLIRLLLIALLIAGVGYGCAPKKAPEVEVAAPAPEPEEAVSEVPVDADPLEPEVEA
APDVEGDLTETEQAVLNSRFGLLFDFELHQTKDVENYFNYFNHKARKTLVRWLKRSEPYL
PYVRRVFTQYGLPQDLVLLPFVESGYNVRAYSWAGAGGMWQFMRGTGRLYGLQSDWWIDE
RRDPYKATDAAARHLRDLYDRFGDWYLALAAYNAGTGKISRALKQAGCNDFFELSEKNRR
LSRRVRLKRETKHYVPKFIAISKIFQNLDTLGFEPVSWDKEVEVVPVKLPGGTDLLALAR
SGGMSWDEFHKYNPAFRRQVSPPHMEAAAYLPVAKADKMMAYLSDPSSRPYAGYTRYRVR
SGDSWWRISRRYGVPISVLKKVNNTRSNTLRPGQHVMVPGSGSGRAVASSSSSKTRAIAA
KRGNYVVRSGDTLWSISQKFGTTVNTVKRSNGLRSSRLKVGQKLYIPNNSAPATKQAVKQ
AGKVKTQLVKYKVRRGDNLWTIARKFGVKVSDLRHWNSLNSRGTIYAGQRLKVYVQ
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
ttgcagatttccaaattgatacggttacttttgattgccctcctgatcgcaggcgtgggc
tatggttgtgctcccaagaaggcgcccgaggtggaggtggccgcaccggcccccgaacca
gaggaggccgtcagcgaggtgccggtggatgcggatccgctggaacccgaggttgaggca
gcaccggatgttgaaggtgatctgaccgaaacggaacaggcggttctgaactcccgtttc
gggctgttgttcgactttgaacttcaccagaccaaagatgttgaaaactatttcaactac
ttcaaccacaaagcacgcaagaccttggtgcgctggctcaagcgctccgaaccatacctt
ccatacgtccgtcgggtcttcacccaatacggtttgccgcaggatctggttctgctgccc
tttgtcgagtccggatataatgtccgggcctattcctgggccggagccggtggtatgtgg
cagttcatgcgtggtacgggtcgtctgtacggcctgcaatccgactggtggatcgacgaa
cgtcgtgacccctacaaagccactgatgctgccgcccgtcacctccgcgatctctacgat
cggttcggtgactggtatctcgcactggcagcgtacaacgccggcacaggaaaaatctcc
cgtgcgctgaaacaggctggctgtaacgactttttcgagttgtcggaaaagaaccgccgc
ctttcccgcagagtccgcctcaaacgggaaaccaaacattatgttccaaaattcatcgct
atttcaaaaatattccagaacctggataccctcggcttcgagccggtttcctgggacaag
gaagttgaagtggttcccgtcaagctccccggcggcaccgacctgctggctctggcccgc
tccggtggcatgagctgggacgagttccacaagtacaacccggcattcagacgtcaggtc
agcccgccgcacatggaggcagcagcctatctgcctgtggccaaggccgacaagatgatg
gcctacctctcggaccccagttcgaggccgtacgcagggtatacacgctacagagtgcgc
tccggtgattcctggtggcgtatctcccgtcgatacggtgtgcctatttcggtcctgaaa
aaggtgaacaatacccgttccaacaccttgcgccccggccagcatgtcatggttcccggt
agcggttccggccgtgccgtggcctcttccagctcgtcaaagacccgggccatcgctgcc
aagcgcggcaattatgtggttcgctccggtgataccctgtggtccatctcgcaaaagttc
ggaacaacggtcaacaccgtcaaacgttccaacggcctgcgttccagccgtctcaaagtc
ggtcagaaattgtacatccccaacaactcggctccggccaccaagcaggctgtcaagcag
gctggcaaggtgaagacccagttggtcaagtacaaggtccgacgcggcgacaacctgtgg
accatcgcccgcaagtttggcgtcaaggtctcagacctgcgccactggaactcgctgaac
agccgcggtaccatctatgccggtcagcgcctcaaggtgtatgtccagtag
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