Pseudodesulfovibrio profundus: DPRO_1720
Help
Entry
DPRO_1720 CDS
T05258
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pprf
Pseudodesulfovibrio profundus
Brite
KEGG Orthology (KO) [BR:
pprf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pprf03032
]
DPRO_1720 (topA)
03400 DNA repair and recombination proteins [BR:
pprf03400
]
DPRO_1720 (topA)
Enzymes [BR:
pprf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
DPRO_1720 (topA)
DNA replication proteins [BR:
pprf03032
]
Prokaryotic type
DNA Topoisomerases
DPRO_1720 (topA)
DNA repair and recombination proteins [BR:
pprf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DPRO_1720 (topA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
ADK_lid
Zn_ribbon_recom
Motif
Other DBs
NCBI-ProteinID:
SOB58620
UniProt:
A0A2C8F8Z4
LinkDB
All DBs
Position
DPRO:1762823..1765252
Genome browser
AA seq
809 aa
AA seq
DB search
MPKDLIIVESPAKVKTISKFLGKDYIVDASVGHVRDLPTRDLGVDEENDFAPQYEVIKGK
EDVVKRLKAAAKKAQTVFLAPDPDREGEAIAWHVAELIRPVNDNIRRIQFNEITAKAVKN
ALEEAQELNEDLFDSQQARRILDRLVGYKISPILWKNVKRGISAGRVQSVALKILVEREK
ERRAFRPDEYWPFKVLLAGENPPPFWMDLHKLEEKAVKPGVNHISNGEDAAALHEALENG
EFVVDSVQEKQRKRSPLPPYITSTLQQDANRRMGYSAKRTMSVAQRLYEGVELGKQGTTA
LITYMRTDSVRIAKDAQQAAKKLILDKFGGDYYPSKTRNFKTKGGAQDAHEAIRPVDVSI
TPEDIKSYLPSEQYKLYRLIWQRFVASQMAPATFWDTTVLVKAPRTQWRAKGERLLFPGF
LAAMDKAKSDGDTELPKLAEGEVLQLNELKKEQKFTQPPPRYSEASLVKTLEELGIGRPS
TYAAIISTLLDREYARQEEKRFIPTELGFTVSDQLSEHFQALMDVGFTAQMENLLDDVAA
GNQDWVRLLNDFGGDFYPTLDKARTEMARSQQVTDIVCENCGKPMAIKFGKTGEFLGCTG
FPSCRTIKNFTRDEQGNIQVLEREKPEETGVKCEKCGRPMAIKQSRRGEFLGCTGYPDCK
SIVNFERDENGKIKVIESEKPKVVGTCPECGGELLLKKARTGSRFIACSNYPDCTFAQPF
STGVACPKEGCEGELVEKSSRRGKLFYSCSTYPKCDYAVWNWPIAEACPKCEHPILTRKT
TKDKGEHIACPKKGCGYTRPIEDKEEDES
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaagatctcatcattgttgagtcccctgccaaagtgaaaaccatttccaagttt
cttggaaaggactacatcgtggacgcttccgtaggtcacgtccgcgacctgcccacccgt
gatctcggcgtggacgaagaaaacgacttcgccccgcaatacgaggtgatcaagggcaag
gaagacgtggtcaaacgcctgaaagccgcagcaaagaaggcacaaactgtcttcctcgca
cctgaccccgaccgcgagggagaggccattgcatggcacgttgccgaactcatccgtccg
gtcaacgacaatatccgccgcatccagttcaacgaaattacggccaaagccgtcaagaac
gcactggaagaggcgcaggaactcaacgaagacctcttcgactcacaacaggcgcgccgc
atcctcgaccgtctggtggggtacaagatttctcccattctctggaaaaacgtaaagcgg
ggcatctccgctggccgtgtccagtccgttgcactgaagattcttgtggaacgggaaaaa
gaacgccgcgcattccgccctgatgagtactggccattcaaggtactgctcgccggagaa
aatccgcctcctttctggatggatttacacaagctggaagagaaagcggtcaaacccggc
gtcaatcacatttccaacggggaagatgccgcggccttgcatgaagcactggaaaacggc
gaattcgttgttgattcggtgcaggagaaacagcgcaagcgttctcccttgccgccgtac
atcacctcgaccctgcagcaggacgccaaccgtcgcatgggatattcggccaaacggacc
atgtccgttgcccagcgcctctacgagggtgtcgagctcggcaagcagggaaccacggcg
ctgatcacctatatgcgtaccgactccgtccgtatcgccaaggatgcgcagcaggccgcc
aagaagctgatcctcgataagttcggcggcgattactacccatccaagacccgtaatttc
aagaccaagggcggggctcaggatgcgcacgaagcgatccgccctgttgacgtttccatc
accccggaagacatcaagtcctacctgccatccgaacagtacaagctgtaccggctgatc
tggcagcgctttgtggcctcgcagatggccccggcaacgttctgggacaccacggttcta
gtcaaagcgccgcgcacccagtggcgcgccaaaggcgagcgtttgctcttcccgggcttc
cttgccgccatggacaaggccaagagcgacggcgacaccgaactgcccaagctggccgaa
ggtgaggtgttgcagctcaatgaactgaaaaaggaacagaagttcacccagccgccgccg
cgttattcggaagcatcccttgtcaagacgctggaagagctgggtatcggtcgtccgtcc
acttacgccgccattatttccaccctgctcgatcgcgaatacgctcgacaggaagagaag
cgtttcattcccacggaactgggcttcactgtttcggatcaactttccgagcacttccag
gcactgatggatgtcggattcaccgcgcagatggagaacctgcttgatgatgtcgcagca
ggcaatcaggactgggtccgcctgctcaacgactttggtggcgatttctatcccacgctg
gacaaggcacggaccgaaatggcgcgctcccagcaggtgactgacattgtctgcgagaac
tgcggcaagcccatggccatcaaattcggcaagaccggcgagttcctgggctgcaccggg
ttcccctcctgccggaccatcaagaacttcacccgcgacgagcagggcaacattcaggtt
ctggaacgggaaaagcccgaggaaacaggcgtcaaatgcgagaagtgcggacgccccatg
gctatcaaacagtccagacgaggcgaattcctcggctgcacaggctacccggactgcaag
agcatcgtcaatttcgagcgggatgagaacggcaagatcaaggtcatcgaatccgagaag
cccaaagttgtcggcacctgccctgaatgcggcggcgaactgctgctcaagaaggcccgc
accggctcacggttcattgcctgttccaactacccggactgcacctttgcccaaccgttt
tccactggcgtcgcctgcccgaaggaaggatgcgaaggcgaactggtcgagaaatcatcg
cgccgcggcaagctgttctactcctgctccacgtaccccaagtgcgattacgcggtctgg
aactggcccatcgccgaggcgtgtcccaaatgcgagcacccgatactcacgcgcaagacc
accaaggacaagggcgagcacatcgcctgccccaagaagggctgcggctacacccgtccc
atcgaggataaagaagaagatgagtcttaa
DBGET
integrated database retrieval system
