Pseudodesulfovibrio profundus: DPRO_2108
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Entry
DPRO_2108 CDS
T05258
Symbol
mutM
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
pprf
Pseudodesulfovibrio profundus
Pathway
pprf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pprf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DPRO_2108 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pprf03400
]
DPRO_2108 (mutM)
Enzymes [BR:
pprf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
DPRO_2108 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
DPRO_2108 (mutM)
DNA repair and recombination proteins [BR:
pprf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DPRO_2108 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
NFACT_N
zf-FPG_IleRS
IKKbetaNEMObind
DUF1786
Motif
Other DBs
NCBI-ProteinID:
SOB59012
UniProt:
A0A2C8F8C6
LinkDB
All DBs
Position
DPRO:2168343..2169158
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AA seq
271 aa
AA seq
DB search
MPELPEVEVIARGLHSTLSGRMVDMIVHADLTRLSDPADTLLPALPGKTIQRVYRRAKIL
LMEMADGHTLAFHLKMTGRVVHGAMRSPEKHDRLMMSLDDGSLLSFSDMRRFGYVRLFGP
GQLKEWDFLKKAGPEPLETSPEILAKRVADRKGRIKALLLDQQIVSGVGNIYADESLFRA
GIHPATRACDVDYDLLVELFSQLQKVLQQAIAENGSSIRNYVNADGDAGAFQNSFFVYGR
KGELCRRCDSCLNVAKVAGRTSTFCPKCQPI
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattgcctgaagtcgaagtaattgcccgtggactgcactctacactgtccggt
cggatggtggatatgatcgtccatgctgatttgacccgcctgagcgatccagcggatacc
cttcttcccgccttgccaggcaaaaccattcagcgtgtgtatcgacgtgccaagatactc
cttatggagatggctgatgggcatacattggccttccatctgaaaatgaccggtcgggtg
gtgcatggcgccatgcgttctccagagaagcacgatcggttgatgatgtcgctggatgac
gggtcgctcctgtcgttttccgacatgcgtcgatttggctatgtgcgtcttttcgggcct
ggccaactgaaggaatgggattttctgaaaaaggctggacctgaaccgttggagaccagc
ccggagatccttgcgaaacgagtcgcagaccgtaaagggcggatcaaggcgttactgctc
gatcagcagattgttagcggtgtgggcaatatttacgcggatgagtcactcttccgggct
ggtattcatccggccacccgtgcctgcgatgtggattatgacttgctggtggagttgttc
agccaattgcagaaggtgcttcaacaggctattgcagaaaacggcagttccatacggaat
tatgtcaacgcagatggtgatgccggtgcatttcaaaacagtttttttgtgtatggcaga
aaaggtgagttgtgccgccggtgcgactcgtgcctgaatgttgccaaggtggctgggcga
acttcgacattctgcccaaaatgccaacctatatga
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