Pseudodesulfovibrio profundus: DPRO_2452
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Entry
DPRO_2452 CDS
T05258
Symbol
rnc
Name
(GenBank) Ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
pprf
Pseudodesulfovibrio profundus
Brite
KEGG Orthology (KO) [BR:
pprf00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
DPRO_2452 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprf03019
]
DPRO_2452 (rnc)
03009 Ribosome biogenesis [BR:
pprf03009
]
DPRO_2452 (rnc)
03036 Chromosome and associated proteins [BR:
pprf03036
]
DPRO_2452 (rnc)
Enzymes [BR:
pprf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
DPRO_2452 (rnc)
Messenger RNA biogenesis [BR:
pprf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DPRO_2452 (rnc)
Ribosome biogenesis [BR:
pprf03009
]
Eukaryotic type
90S particles
RNase
DPRO_2452 (rnc)
Prokaryotic type
rRNA processing factors
DPRO_2452 (rnc)
Chromosome and associated proteins [BR:
pprf03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
DPRO_2452 (rnc)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
SOB59360
UniProt:
A0A2C8FBT6
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All DBs
Position
DPRO:2532831..2533514
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AA seq
227 aa
AA seq
DB search
MDTGNLQECIHHRFGQVKLLATALTHSSYANEQEGSDDNERLEFLGDAVLELCISEEGYK
RYPDAPEGHLTRIRSQLVKEQSLAALARELKLHHYLLLGKGEEQQGGRERDALLADAFEA
LLGAVFLDAGFEVAKKVTLGIFEDKWPKRAVVPENKDFKSRLQEVSQEQFKGRPNYVLAG
TTGPEHEKLFDVDATLPSGEVFRGRGTSVKRAEQDAAHKALEFLNDQ
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atggatacgggtaaccttcaagagtgtatccaccataggtttgggcaagtcaagctcctc
gccaccgcactgacacatagttcctacgccaacgaacaggagggcagcgacgacaatgag
cgtcttgagttcctgggcgatgccgtactggagctgtgcatatcagaagaagggtataaa
cgataccccgatgcgcccgagggacacctgacccgcatacgttctcagctggtgaaggaa
cagagtcttgccgccctggcaagagagttgaaactgcaccattatttgctgttgggcaag
ggcgaagaacaacagggcggccgcgaacgcgacgcattgctggctgacgcctttgaagcg
ttgctgggggcagtttttctggatgcgggattcgaggtggccaaaaaagtgacgctgggc
attttcgaggacaaatggccgaaacgggcggtagtccccgagaacaaggacttcaagagt
cgcctgcaggaagtgtcgcaggagcagttcaaaggacgacctaactacgtgctagccgga
accacgggaccggagcatgagaagctctttgatgtggacgcaacgctgccatcaggcgaa
gtgtttcgcggacgcggaaccagtgtcaagcgtgcggagcaggatgctgctcataaagcg
ctggaattcctcaacgatcaatag
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