Pseudodesulfovibrio profundus: DPRO_2696
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Entry
DPRO_2696 CDS
T05258
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
pprf
Pseudodesulfovibrio profundus
Pathway
pprf00470
D-Amino acid metabolism
pprf00550
Peptidoglycan biosynthesis
pprf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pprf00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
DPRO_2696 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
DPRO_2696 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pprf01011
]
DPRO_2696 (murD)
Enzymes [BR:
pprf01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
DPRO_2696 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
pprf01011
]
Precursor biosynthesis
Amino acid ligase
DPRO_2696 (murD)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
AlaDh_PNT_C
NAD_binding_8
FAD_binding_3
Pyr_redox
NAD_binding_7
TrkA_N
Shikimate_DH
2-Hacid_dh_C
HI0933_like
Pyr_redox_2
XdhC_C
Pyr_redox_3
F420_oxidored
HcgC
DAO
3HCDH_N
Ldh_1_N
Thi4
Motif
Other DBs
NCBI-ProteinID:
SOB59605
UniProt:
A0A2C8FAD5
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All DBs
Position
DPRO:complement(2779616..2780929)
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AA seq
437 aa
AA seq
DB search
MNRIVRKFIDESILSGKQGVVVGAGKSGLAAARLLDVLGAHVRVVDRNEKVSDTVLGDLK
GKVELITGEHEKSHFSDADIVVLSPGVPVKKMAHALEDVPAVNIVAELEFASWFIEAPIL
AITGTNGKTTTTTLVSEIFEHAGRKVFTGGNIGTPLCEYLLDMEPAEVIVLEVSSFQLQN
CRQFQPHVGVLLNFAANHLDYHESMEEYLEAKLMLFSQMTGEGTALIHESVKPVLDENYD
GRGFTNAHVEWFGPTDRFEAPYLPGEHNRSNVEAAWQAVKRFGITEEQAAEAIRNFKPLS
HRIEPVEEIDGVLYVDDSKATTLDAVMAAVNAFDRPIRLLMGGVWKGGDVEGFAKAVKDR
VVHIGLFGGSRDIFEPVLSKSFPVTWDETLGQAVKRLASDARKGDVVLLSPATASFDQYN
SYGHRGDDFKRAVKELT
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
gtgaatcgtatcgtccgcaaattcattgatgagtccatcctctccggcaagcagggagtg
gtcgtaggagcaggcaaatccggcctggccgccgcccgtcttcttgatgtgctgggcgcg
cacgtgcgcgtggtggatcgcaatgaaaaggtatccgataccgtcctgggcgatctcaag
ggcaaggtggagctgatcacgggtgagcacgagaagtcgcatttctccgatgccgacatc
gtcgtgctgtcaccgggcgtacccgttaaaaagatggcccatgcgctggaagacgtacct
gccgtcaatatcgtggccgagttggaattcgcatcatggtttatcgaagcgccgatcctc
gccatcaccggcaccaatgggaaaacgacgaccaccacactggtcagcgaaatattcgag
cacgcaggtcgcaaggttttcaccggcggcaacatcggcacacccctgtgcgagtacctg
ctggacatggaaccggcagaagtcatcgtgctggaggtctccagcttccagttgcagaac
tgccgccagttccagccgcacgttggcgtcctcctgaactttgcagccaatcatctggac
taccatgaatccatggaagagtaccttgaggcaaagctgatgctcttcagccagatgact
ggtgaaggcactgcgctgattcacgagtcggtcaagcccgttctggatgagaactatgat
ggacgcggattcaccaacgcccatgtcgaatggttcggtcccaccgaccgtttcgaagcc
ccctatctcccgggcgagcacaaccgctccaacgtggaagccgcctggcaggcagtgaaa
cgtttcggcatcaccgaagagcaggcagccgaagccatcaggaatttcaagcccctgtcc
caccgcatcgagccggtggaggaaatcgacggggtgctgtacgtggatgattccaaggcc
acgacacttgatgccgtcatggccgcggtcaacgcgtttgatcgtcccatcaggctgctc
atgggcggcgtctggaaaggcggcgatgtggaaggctttgccaaggcagtcaaagaccgc
gtggtccacattggactgttcggtggcagccgcgacattttcgagccggttctgtccaag
tcattcccggtgacctgggacgagacactcggtcaggccgtcaagcggctggcttccgat
gcccgcaaaggcgatgtggtcctgctttccccggctacggccagctttgaccagtacaac
agttacggtcatcgcggcgacgacttcaaacgcgccgtgaaggagctgacatga
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