Pseudodesulfovibrio profundus: DPRO_3304
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Entry
DPRO_3304 CDS
T05258
Symbol
ychF
Name
(GenBank) putative GTP-binding protein
KO
K06942
ribosome-binding ATPase
Organism
pprf
Pseudodesulfovibrio profundus
Brite
KEGG Orthology (KO) [BR:
pprf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pprf03009
]
DPRO_3304 (ychF)
Ribosome biogenesis [BR:
pprf03009
]
Prokaryotic type
Other maturation factors
DPRO_3304 (ychF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YchF-GTPase_C
MMR_HSR1
FeoB_N
MeaB
AAA_18
TGS
Ribosomal_L7Ae
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
SOB60216
UniProt:
A0A2C8FCF9
LinkDB
All DBs
Position
DPRO:3423054..3424151
Genome browser
AA seq
365 aa
AA seq
DB search
MSLSIGIVGLPNVGKSTLFNALTKAQNAESANYAFCTIEPNKAVVPVPDPRIDVLAELVN
PQRVQYSTVDFVDIAGLVAGASKGEGLGNKFLGNIRETQAILHVVRCFDNDDVIHVSNSV
DPIRDIDVIETELILADVQVLENRLERMEKMLKGDKTLAPKIEAAKALVEHMNEGQPAST
FDKEMKGLDELLAELRLITAKNVIYCANVDDEGVMEDNEYVKLVRALAEERGAEFVKISA
KMEEELLGLDDEEAQEFLDSFGIEESGLHQIIRTGFKSLGLISYFTAGVKEVRAWTIHDG
DKAPQAAGVIHTDFERGFIRAEVVGYDQYVEHGSESKCRTAGVLRVEGKEYVMKDGDVVH
FLFNV
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgtcacttagtataggaatcgtcggattgcccaacgtcggcaagtccaccttgttcaac
gcattgaccaaggcccagaacgccgaaagcgccaactatgctttctgcaccatcgaaccc
aacaaggccgttgtgccggtcccggacccgcgcatcgacgtgctggccgaactggtcaat
ccccagcgtgttcagtattccacggtggatttcgtggatatcgccggactggtggcagga
gccagcaagggtgagggactgggtaacaagttcctcggcaacattcgcgaaacgcaggcc
attctgcatgtcgtccgttgtttcgataacgacgacgttatccacgtgtccaattccgtg
gacccgatccgcgatatcgacgtcatcgagaccgagttgatcctggctgatgtacaggtg
ctggagaatcgtctggagcgtatggaaaagatgctcaagggcgacaaaaccctggccccg
aagatcgaggcagccaaggcgcttgtcgagcacatgaacgaaggccagcctgcatcgacc
tttgacaaggagatgaaaggactggacgaactgctcgccgaactgcgtctgatcacggcc
aagaacgtcatctattgtgccaatgtggatgacgaaggggtcatggaagacaacgagtac
gtgaagttggttcgcgcccttgcagaagagcgtggtgccgagttcgtcaaaatttccgcc
aagatggaagaagaactgctcggcctcgacgatgaagaggcgcaggaatttcttgattcc
ttcggcattgaagagtccggcttgcatcagatcatccgcaccggattcaaatcccttggg
cttatcagctatttcacggccggtgtgaaagaggttcgcgcatggaccatacatgacggc
gacaaggctccgcaggcagccggtgtcatccacaccgatttcgagcgcggcttcattcgc
gccgaggttgtcggatacgatcagtacgtggagcacggctccgaatccaaatgtcgcacc
gctggtgtgcttcgggtggaaggaaaggaatacgtcatgaaagatggcgacgtcgttcac
tttctgttcaacgtctag
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