Pseudodesulfovibrio profundus: DPRO_3320
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Entry
DPRO_3320 CDS
T05258
Symbol
nifA
Name
(GenBank) Nif-specific regulatory protein
KO
K02584
Nif-specific regulatory protein
Organism
pprf
Pseudodesulfovibrio profundus
Pathway
pprf02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pprf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
DPRO_3320 (nifA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprf03000
]
DPRO_3320 (nifA)
Transcription factors [BR:
pprf03000
]
Prokaryotic type
Helix-turn-helix
Other families
DPRO_3320 (nifA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
GAF_2
HTH_8
GAF_3
AAA
AAA_5
AAA_2
AAA_16
Mg_chelatase
AAA_22
nSTAND3
AAA_7
AAA_3
ABC_tran
RsgA_GTPase
HTH_50
NACHT
Motif
Other DBs
NCBI-ProteinID:
SOB60232
UniProt:
A0A2C8FDJ6
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All DBs
Position
DPRO:3443633..3445216
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AA seq
527 aa
AA seq
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MSSTVHGLKLSALLTICQAIDQALDLESALDGVLRILSEQLSMQRATVTLYDSKTGHLSI
NASYGLTSEEKQRGVYRLDEGVTGRIFQTGEPFYVPDIDKEPLFLDKTGSRRLKRGMISF
VGVPIVLHGDPIGVLNVDRLFADDVALEEDVDFLKVVATLIGQFISLNEKVLKREAVLKR
ENTSLKYQISKNSKGPYIVGQSQPMVEVQRQMEKVSPTRATVLLLGESGVGKTLIARIIH
ELSERKGHPFIKVNCASIPGNLLESELFGHEKGAFTGASGSRPGRFEEADSGTIFLDEIG
ELPLGLQAKLLRVLQEKELERLGSNRTRAVDVRILAATNRDLGDLVERNKFRLDLYYRLN
VFPIRIPPLRERKEDITSLLNHFINQMAENYGRQMIFTSTALDALIRYDWPGNVREMQNL
IERLVIMSDTERISLEFLKSYLAPGQTAAVQEVVGFSEEAPRHSTLREFERNEVLAALER
SGWIQYKAAEALGLSARQMGYRVKKYGLESMIAEGRANLRRRKEKIS
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctacagtgcatggattgaaactctccgccctcctgaccatctgtcaggccatt
gatcaggctctggatctggaatccgccctggacggtgtcctgcgcatcctttccgaacag
ctatccatgcaacgcgccactgtgacgttgtatgactccaaaaccggccacctctccatc
aacgcatcctatgggttgaccagtgaggagaaacagcgtggcgtgtatcggttggatgag
ggcgttaccgggcgtattttccagaccggtgagccgttttatgtgccagatattgataag
gagccattgtttcttgataagaccggctccagacgattgaagcggggcatgatctccttt
gtgggtgtgccgattgttttgcatggcgatcccatcggagtcctcaatgtggaccggttg
ttcgctgacgatgtggcccttgaagaggatgtggacttcctcaaggttgttgcgacactt
atcggtcagtttatctcgctcaatgagaaggtgctgaaacgggaggccgtgctcaagcgg
gaaaacacctcccttaaatatcagatttccaagaattccaagggcccgtatatcgtcggc
cagtcgcagcccatggtcgaggtccagcggcagatggagaaggtatctcccactcgcgcc
accgttcttctgctgggcgaatccggtgtgggaaaaacgctcatcgcacgcatcatacat
gaactttccgagcgaaaagggcacccgttcattaaagtgaactgcgcgtccatccccggc
aatctgctcgaatccgaactgttcggtcatgaaaagggtgcgttcaccggagccagtggt
tcgcgccccggtcgtttcgaggaagcagacagcggaacgatctttttggacgagattggc
gaactccccttggggttgcaggccaagctgttgcgtgtgctgcaggaaaaggaactggaa
cgcctcggctccaaccgtacccgtgcagttgatgtgcgaatccttgccgcaacgaaccgt
gacctcggtgatctggtagagcgcaacaagttccggctcgacctctattatcgactcaat
gtcttccccatacgtatcccccctctgcgggagcgaaaggaagatatcacatcgctgctc
aatcattttatcaatcagatggccgagaactacgggcgtcagatgatctttacttccact
gcgctcgatgccctcatccggtacgactggccgggtaatgttcgcgagatgcagaatctg
atcgaacggctggtcattatgtccgataccgagcgcatcagcctggagttcctcaaatcc
tacctcgcaccggggcagactgccgctgtgcaggaagttgtggggttttccgaggaagca
ccgcgccattccacgctccgtgagtttgagcgtaatgaggtgctggccgctctggagcgc
agcggctggattcagtacaaggctgctgaggcactcgggttgtcagccagacagatgggg
tatcgcgtgaagaaatatggacttgaatcgatgatagcggaagggcgggccaacctgcga
cgcaggaaagaaaaaatttcatga
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