Pseudodesulfovibrio profundus: DPRO_3349
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Entry
DPRO_3349 CDS
T05258
Name
(GenBank) conserved protein of unknown function
KO
K20276
large repetitive protein
Organism
pprf
Pseudodesulfovibrio profundus
Pathway
pprf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pprf00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DPRO_3349
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_4
Big_9
Cadherin_5
Cadherin
HemolysinCabind
Cadherin_3
DUF4114
Motif
Other DBs
NCBI-ProteinID:
SOB60261
UniProt:
A0A2C8FCT3
LinkDB
All DBs
Position
DPRO:complement(3479832..3488846)
Genome browser
AA seq
3004 aa
AA seq
DB search
MADIQLTTGGVIQVPDNGNESVSYALPNNGEVVFGFDIGEAVFSSSNENLVISMEGQGDI
IIENYENVARSGNAPTFTLLNGEQVPGDVYLFVFNQPGQETETLETAADGGASGSGVGAY
TDDSGTLYRSFDRLQGLESDGNSRLIGDQEDSDIGAATFASSTETNLSAPSVSGPLNLTM
EEDGTIIIRDTDILSRVSDPDPGTFLGVTGLTITGGTLTEVRDGAGNLLYWTFEPDADFN
GDLDINYTVSDGTFTTAGGGTLVVTPVNDAAIFSGDDDIAVAEDVLIKTSGDLDVSDIDD
PSEEYIDTTRAPEGANYGILSIDANGQWTYTLNNTSDAIQQLPEGETLTETITVYSIDGT
SHDITVTITGTNDVPSISGNTTGGVTEEAAATLTATGSLLAEDVDLDEDGFSTTVDNTGK
VGQLTITENGVWEYTVDNTTTAIQQLGEDDTLTETFTVTSKDGSATETITITITGTNDVP
RISGDTTGGVTEEAAATLTTSGTLLSEDVDLDEDGFSTTVDNTGKLGQLTITENGAWEYT
VDNDTTAIQQLGEDDTLTETFTVTSKDGSATETITITITGTNDVPRISGDTTGGVTEEAA
ATLTTSGTLLSEDVDLDENGFSITVDNTGKLGQLTITENGAWEYTVDNDTTAIQQLGEDD
TLTETFTVTSKDGSATETITITITGTNDVPRISGDTTGGVTEEAAATLTTSGTLLSEDVD
LDENGFSITVDNTGKLGQLTITENGAWEYTVDNDTTAIQQLGEDDTLTETFTVTSKDGSA
TETITITITGTNDVPRISGDTTGGVTEEAAATLTTSGTLLSEDVDLDEDGFSTTVDNTGK
LGQLTITENGAWEYTVDNNTAAIQQLGEGDTLTETFTVTSKDGSATETITITINGTNDLP
TISGDDSSSVKELRADVDQDVSLTTGGTLTIDDDDAGESLFDTNVDQGDNIGELTITESG
EWTYSIDNNIPEVQELSTGDSFTETFTVTSKDGSTTETITVVVNGTNDAPVITGVGMHAS
NFEQGASGWTDNTTTETSTDFGSFLGRFGMGDSTTKTFDIVEGTETVTIDFDVYEIDSWT
QTKAWGFDDLVITVDGNDIVLPLERSRRNDSDEDTDFRSGTITTDDGSVITWEFTAQDDG
RSNIGFGGYEDQIHHMSITITNPGDSVTLELGSTLNEALNNESFGIDNVLVNAVDESGNP
VFAILENTATDTDIAQVTAEDIEGDEIFFDLVATAADGSDASHMFTINANGVVTAIGGAG
FDFETNASYEITVTPKNIDSEGELLGDPYSFTVHVGDVNEAPVVSGETAEVDEESTISGS
VADPDQISDVDTDIEDLEFSLVDPDNAPEGLTFNPDGTYTFDASNYELAEDERLSFDVEY
NVKDGDNTSTATLTINVTGINDAPELSFLTNSSNLLVNGSFEDVVIEQGGWAQGHTPEGW
QIEGGDRWEVMRGDRFGIDGATDGDNVIDFGVGHGEALIISQTIDSLPKGEYTLTLDAFD
RGENLGEDPSGILNVYWNNEHIGTIDPNSDNWTSNSFTVNIDTEGGSGTLKLESFNNDGY
GIVVDNVRLSTSVEPENNTVSIQENVALGTYIATAVGEDVDTTNLTFSIDTDGPFTIDPN
TGVITVNGEVDFEAIESAGGQYAIEVSVSDGIADPVTDTLYVNVGDVNEGFTAPNVTFDS
IDEETSITFSKEELLENASDLDGDDLAVTSVTLEKGDGTLVDNEDGTWTFEPTDDWSGDV
EFGFTVTDGELTADRTASVKVENINDPTLLTFAAAVNDDNFILNGSFESIDIDSGDWAKG
HVPEPWQLVEGDRWEVMSGNRDGIPGASDQDNVIDTGVGSGEALVISQTINGLSQGQYVI
ELDLFDRGANLNQADSGNIDVYWNGQLVGSFNPENIDWETGTIVVDVPEGATSGELVLAS
HNNDGFGNVIDNITMRSVDTLTENPELNVDAANGTYVATAVASDIDSTDLTFSIEGDSPF
SIDPDTGVITLTDSAAIDWDNADDLSVTVTVTDGQNNTVEETLNIGVNERPTGSDFTVEE
INMNQPVEINFIEDTNVFDADGDVTGITITSEPTGGTLLYNGEQVVVGETYDLGSGSFTF
EADPSQSSTFVLGSIDGQNLNWDNWGTLVQGGHKLTQTWGDNTVTVTSGKLKLSGNAEEG
YTFHANGTGGKFVQYDNDANHIGQGIGVGKGDGIENTKNHTESITVDFGTTIDSATVGFD
GLGGHFDPDNVEVDANAVWIAMLDGEIVGSGAVKNLGNGELLNEYTITSEMTGGNGFDEI
VFTTDSDVGSNWELRYVGVERGLETSFDYIPVDNDGLPAAEESTVTIDINPQTLSNEAPT
LDLAQGTEVTVDSEHASYTNMLGVYFVSDGDPIPESPEVILTNSNNASMLRNVLETFEGD
QDVHFFLISDAGGKGITNGDIQSSNLQFVMHEGHWALSLDRGGNSKIVDVQFDIAAFNPD
GEEATFQFVNEADGSLTVLVDDQLRTNDDDDFDDLVISVDSAQDNTADYAATYVDSEGKV
AVAGDVSINDVDSAEMSGATIVLTNAKDGDILNTGDLPDGMIAEITEANGEITVSLSGDF
PMDVYEDVIGGITFENSRTTPDETDRVIEITVMDTAGEESNTATSTIAVVDVAATGQIVL
NSGFESTATMTENPFATTEVDNWSNNGNDMAVRDYAGERTRDNGQFMELDSTHGNDVLSQ
TIATKAGETVSISFAFGGTWGSTFESNNFDVLLGDSLVASVLWNSDSAKYELVQDGVVIQ
TYEPNIKNAHWAEAEFEAVAPTDHAELTFAEHHSAGGDHTGTIIDNVQVERVFDTQIIGN
DDDLLNGSKGDDIIFATDPEQPEDAAADGVQIFGDEGNDAIYGGNGNDLLNGGDGNDFIF
GGDGDDIINAGSGNNYVITGEGNDTILIDRSALSDGEDMIVVEDFHVGTDALELGDGMSV
KDITSHTDNSIDYTEVLVGDDQGNDVVVKLLGVTQTELSEHQTTISDTNTADDLIQFMID
SGTE
NT seq
9015 nt
NT seq
+upstream
nt +downstream
nt
atggcagacattcagctcacaaccggcggcgtcattcaggtaccggataatggtaacgaa
tccgtatcatatgctcttccgaacaatggagaagttgtattcggcttcgacataggggaa
gccgtattcagcagttccaacgagaaccttgtcatctccatggagggacagggggatatc
atcattgagaactacgagaacgtggcccgctccggcaacgctccgacattcactttactg
aatggagaacaggtccccggcgatgtctaccttttcgtcttcaatcagcctggacaggaa
accgaaacgcttgagactgctgcagacggcggcgcttccggaagtggtgttggagcttac
accgacgacagcggaacgctgtacagaagcttcgaccgcctccagggattagagtctgac
ggaaactcccgactgatcggtgatcaagaggattccgacattggtgctgccacttttgcc
tcgtccaccgaaaccaacctgagtgctccttccgtatccggtccgcttaatcttaccatg
gaagaagacgggaccattatcattcgtgacactgacattctctcgcgtgtgtccgatccc
gatccagggactttcctgggcgttaccggtttgaccatcaccggcggcaccttaactgag
gtccgcgacggtgcaggcaaccttctctactggactttcgaacccgatgccgacttcaac
ggcgacctcgacatcaactacacggtgagcgacggcaccttcaccaccgcaggcggcggc
acactggttgtcactccggtcaatgatgcagctattttctccggcgatgacgacatagca
gttgctgaagacgttctcattaagacatccggcgatcttgatgtttccgacatcgatgac
ccctccgaagagtacatcgacaccacccgcgccccggaaggtgccaactacggtattctt
tccattgatgctaatggccagtggacttacacccttaataacaccagtgacgccatccag
cagttacctgaaggcgagacactgactgagaccatcactgtttattccattgatgggaca
tcccatgacatcacggtcaccatcactggaaccaatgatgtgcccagcatttccggtaac
accaccggcggcgtgaccgaagaagctgccgccactcttaccgccacaggttccctgctg
gccgaagatgtggacctcgacgaagacggcttctccaccaccgtggacaacaccggcaag
gtcggtcagttaaccatcactgaaaacggtgtttgggaatacactgtcgacaatacgacc
actgccatccagcagttgggtgaagacgatacgctcaccgaaacgttcaccgtcacctca
aaggacggctcggctaccgagaccattactatcaccatcactggcaccaatgatgttccc
aggatttccggtgacaccaccggcggcgtgaccgaagaagctgccgcaacgctcaccact
agcggcaccctactttccgaagacgtggacctcgacgaagacggcttctccaccaccgtg
gacaacaccggcaagctcggtcagttgaccatcactgaaaacggtgcatgggaatacact
gtcgacaatgacaccaccgccatccagcagttgggtgaagacgatacgctcaccgaaacg
ttcaccgtcacctcaaaggatggatcggctaccgagaccatcactatcaccatcactggc
accaatgatgttcccaggatttccggtgacaccaccggcggcgtgaccgaagaagctgcc
gcaacgctcaccactagcggcactctgctttccgaagacgtggacctcgacgaaaacggc
ttctccatcaccgtggacaacaccggcaagctcggtcagttgaccatcactgaaaacggt
gcatgggaatacactgtcgacaatgacaccaccgccatccagcagttgggtgaagacgat
acgctcaccgaaacgttcaccgtcacctcaaaggatggatcggctaccgagaccatcact
atcaccatcactggcaccaatgatgttcccaggatttccggtgacaccaccggcggcgtg
accgaagaagctgccgcaacgctcaccactagcggcactctgctttccgaagacgtggac
ctcgacgaaaacggcttctccatcaccgtggacaacaccggcaagctcggtcagttgacc
atcactgaaaacggtgcatgggaatacactgtcgacaatgacaccaccgccatccagcag
ttgggtgaagacgatacgctcaccgaaacgttcaccgtcacctcaaaggatggatcggct
accgagaccatcactatcaccatcactggcaccaatgatgttcccaggatttccggtgac
accaccggcggcgtgaccgaagaagctgccgcaacgctcaccactagcggcactctgctt
tccgaagacgtggacctcgacgaagacggattctccaccaccgtggacaacaccggcaag
ctcggacagttgaccatcactgaaaacggcgcatgggaatacactgtcgacaataacacc
gccgccatccagcaactgggtgaaggcgacacgctcaccgaaacgttcaccgtcacctca
aaggacggctcggctaccgagaccattactatcaccatcaacggcaccaatgacttgccc
accatttccggtgacgactcctcttctgtaaaggaactgagagcggatgtggatcaggat
gtctcgctgactacaggcggcaccctcaccatcgacgatgatgatgccggcgaatctctt
ttcgataccaatgtcgatcagggtgataatatcggcgaactgaccatcaccgaatctggc
gaatggacatattccatcgacaacaacattcctgaggttcaggaactgagcaccggtgat
tcgttcaccgagacctttaccgtcacctccaaggacggatcgaccaccgagaccatcact
gttgtagtcaacggcacgaatgacgctccggtcatcacgggtgttggcatgcacgccagc
aactttgagcagggagcctctggctggactgataacacgaccaccgaaaccagtacggat
ttcggcagcttcctcggccgattcggcatgggcgacagcaccaccaagacatttgatatt
gtggaaggaaccgagacggtcaccatcgacttcgatgtgtatgagatcgactcatggacc
cagacaaaggcctggggatttgatgatctcgtcattacggtagatggtaacgacatcgtc
ctgccgctggagcgcagccgacgcaacgacagcgatgaagacaccgatttccgaagtggt
accatcacaaccgacgacggttctgtcatcacctgggaattcactgcccaggacgatggc
cgctcgaacatcggctttggtggatacgaagaccagatccaccacatgtccatcaccatc
accaaccccggtgacagcgtgaccctggaacttggttccacacttaacgaagctctgaac
aacgaatcgttcggcatcgacaacgtactggtcaatgcggttgacgagtccggcaacccg
gtcttcgccattctggaaaacacggccaccgacaccgacattgcacaggtgacagcagaa
gacatcgaaggcgatgagatcttcttcgacctcgttgccactgctgctgacggttctgat
gcgagccacatgttcaccatcaatgccaacggtgttgtgaccgccattggtggcgcagga
ttcgacttcgagaccaacgccagctacgaaatcacggtaactcccaagaatattgatagc
gaaggcgaattgcttggcgatccatactccttcaccgttcatgtgggcgacgtgaatgaa
gccccggtcgtgagcggcgaaaccgctgaagtcgatgaagagtcgactatctccggctct
gtggccgatcccgatcagatctctgacgtcgacaccgacattgaagacctggagttcagc
cttgttgatccggataatgcgcccgaaggcctgaccttcaatcccgatggcacctacacc
ttcgatgcttccaactatgagttggccgaagacgaacggctcagctttgatgttgaatac
aacgtaaaggacggcgacaacacgtccacagccacgctgaccatcaacgtgaccggcatc
aatgacgcaccggaactcagcttcctgaccaattcctccaacctgctcgtcaacggcagc
tttgaagatgtcgtcatcgaacagggcggatgggctcaaggccacactcccgaaggctgg
cagatcgaaggcggcgaccgctgggaagtcatgcgcggtgatcgcttcggcatcgacggc
gccaccgacggtgacaacgtcatcgacttcggcgttggtcatggagaagcgctgatcatc
tcccagaccatcgattctcttcccaagggagaatacaccctgaccctcgacgcctttgat
cgcggcgagaatctgggcgaagaccccagcggcatcctgaatgtctactggaacaacgaa
catatcggtaccattgatcccaattccgacaactggaccagcaactcttttaccgtcaat
atcgacaccgagggcggcagcggcacgttgaagctggaatcattcaacaacgacggatac
ggcatcgttgtcgacaacgtccgtctttccacttctgttgagccggaaaacaacacggtt
tccattcaggagaacgtggcccttggcacatacatcgccaccgcagtgggtgaagatgtc
gacacaaccaacctgaccttctccatcgataccgacggaccgttcaccatcgacccgaac
accggcgtcatcaccgtgaatggcgaagttgatttcgaggccattgagagcgcaggcggc
cagtacgccattgaagtgtccgtgtccgacggcattgccgatccggttaccgacaccctg
tatgtcaatgtcggggatgtgaatgaaggattcaccgcacctaatgtcacgttcgactcc
attgatgaagaaacatccatcactttcagcaaggaagagcttctcgaaaacgcttccgac
ctggacggcgacgacctcgccgtgacttcggtcacccttgaaaagggcgatggcactctt
gtcgacaacgaagatggaacctggaccttcgagcccaccgatgattggagtggcgatgtt
gaattcggtttcaccgtaacagacggagaacttaccgctgacagaaccgcttctgtcaag
gtcgagaacatcaacgatccgaccctgcttacatttgctgctgcagtgaatgatgacaac
ttcatccttaacggcagcttcgaaagcatcgacatcgatagcggtgactgggcgaagggt
cacgtacccgagccttggcagctggtcgaaggcgaccgctgggaagtcatgagcggcaac
cgcgacggcattcccggtgcatccgaccaggacaacgtcattgataccggcgtaggaagc
ggcgaggcactggtaatttcgcagaccatcaatggcctcagccagggacagtatgtcatc
gagctggacctctttgaccgcggagccaacctcaatcaggccgacagcggcaacattgac
gtgtattggaacggccagttggtcggttctttcaaccccgaaaacattgactgggaaacc
ggcaccatcgtcgtggatgtccccgaaggtgcgacctccggcgagctggttctggcctcc
cataacaacgatggattcggtaacgtcatcgacaatatcaccatgcggagcgtggacacc
ctgaccgagaatccggaactgaacgtggacgccgccaacggcacctacgtcgccaccgca
gttgcatcggacatcgactccactgacctcaccttctctatcgaaggcgactcaccgttc
tccatcgaccctgacaccggagtaatcaccctgaccgactccgcagcaatcgactgggac
aacgctgacgacctgtctgtcactgtcaccgtgacggacggacagaacaacaccgttgaa
gagaccctgaatatcggcgtcaacgaacgtcccaccggatcggacttcactgttgaagaa
atcaacatgaaccagccagttgagatcaacttcatcgaagacaccaacgtctttgatgca
gacggcgatgtcaccggcatcaccatcacttccgaacccaccggcggcaccctgctctac
aacggcgagcaggtggttgttggcgagacctacgatctcggctccggttccttcaccttc
gaagcagacccgtcccaatcatccacctttgttctcggctccatcgacggccagaacctg
aactgggacaactggggaacgttggtacaaggcggccacaagctcacccagacatggggc
gataacaccgtgaccgtcaccagcggcaagctcaagctgtccggtaatgccgaagaagga
tacaccttccacgcaaatggaaccggcggaaagttcgtgcaatacgacaacgatgcgaat
catatcggccaggggatcggtgtcggcaagggagatggaattgaaaataccaagaaccac
actgagtccatcactgttgattttggaacaaccatcgacagtgccactgtcggattcgac
ggactgggcggccactttgatcctgataacgtagaggtggatgccaacgcggtctggatc
gccatgctcgacggcgagatcgtcggctccggcgcggtcaagaaccttggcaacggtgaa
ctgctgaacgagtacaccatcacctcggaaatgaccggtggaaatggtttcgatgagatc
gtattcactactgactccgacgtcggttccaactgggaactgcgttatgttggtgtggaa
agaggccttgagacttcctttgattacatccccgtggacaacgacggtcttccggcagca
gaagaatccactgtaaccatcgatatcaatcctcagaccctgtccaacgaggctccgact
ctggacctggctcagggaaccgaggtcactgtcgacagcgaacatgcgagctacaccaac
atgctcggcgtttacttcgtgtccgatggcgatcccataccagaaagcccggaagtcatt
cttaccaattccaacaatgcgtccatgctgcggaacgtactcgagaccttcgagggcgat
caggatgtccacttcttcctgatctccgatgcaggtggcaagggcatcaccaatggcgac
attcagtcctcgaacctccagttcgtcatgcatgaagggcattgggctctctcccttgac
cggggaggaaacagcaagattgtcgacgttcagttcgacattgccgccttcaaccccgat
ggagaggaagcgacattccagttcgtcaacgaagccgatggttcactgaccgtattggtc
gatgaccagttgcggaccaatgacgatgacgatttcgacgatctggtcatcagcgtcgac
tccgcacaggacaacaccgctgattacgctgccacctatgttgacagcgagggcaaggtt
gccgtggccggcgatgtctccatcaatgatgtggactccgctgaaatgtccggtgcgacc
atcgttctgaccaacgccaaggatggtgacatcctgaataccggcgacctgccggacggc
atgatcgctgagataaccgaggcgaacggcgaaatcactgtctccctttccggcgacttc
cccatggacgtctatgaagatgtcataggaggcatcaccttcgaaaacagccgcactact
cctgatgagaccgaccgggtcatcgagatcacggtcatggatactgccggagaagagagc
aacaccgccacctcgaccattgctgtcgtggatgttgcggccaccggccagattgtgctg
aactcgggatttgagtccactgcgacaatgactgaaaacccgtttgcaacgactgaggtc
gacaactggtctaacaatggcaacgacatggccgttcgcgactacgccggagaaagaact
cgcgataacggccagttcatggaattggattcgacccacggcaatgacgttctctcgcag
actatcgccaccaaggcaggagagactgtctccatcagcttcgcttttggcggaacctgg
ggctcgacgttcgaatcaaacaacttcgatgtcctgctgggcgatagccttgtagccagc
gtgctctggaatagtgattccgcgaagtacgaactggttcaggatggcgtagtcattcag
acctacgagccgaacatcaagaacgctcactgggcagaagctgagttcgaagctgtggcg
cccactgatcatgctgagttgacctttgccgagcaccactccgcaggcggagatcacacc
ggaacgatcattgacaacgtccaggtggagcgcgtcttcgacacccagatcatcggtaat
gatgacgatctgctcaacggttccaagggtgacgacatcatcttcgcaaccgatccggaa
cagcctgaagacgctgccgcagatggtgtgcagatcttcggcgatgagggcaacgatgcc
atctacggcggaaacggcaacgaccttctgaatggcggcgacggcaatgacttcatcttc
ggcggcgacggtgacgacatcatcaacgccggtagtggcaacaattacgtgatcacgggt
gaaggcaacgacaccatcctcatcgacagatcagcattgtctgatggtgaagacatgatc
gtggtcgaggacttccacgtcggcaccgacgcccttgaactgggtgacggcatgtcggta
aaggatatcacctcgcacacggacaattccatcgattacacggaagtgctcgttggtgac
gatcagggcaacgatgttgtcgtcaagctcctgggcgtaacgcaaaccgaactctccgag
caccagaccacaatcagcgacaccaacaccgctgacgacctaatccagttcatgatcgac
tccggtactgaataa
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integrated database retrieval system
