Pseudodesulfovibrio profundus: DPRO_3532
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Entry
DPRO_3532 CDS
T05258
Name
(GenBank) Hydrogenase
KO
K15836
formate hydrogenlyase transcriptional activator
Organism
pprf
Pseudodesulfovibrio profundus
Brite
KEGG Orthology (KO) [BR:
pprf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprf03000
]
DPRO_3532
Transcription factors [BR:
pprf03000
]
Prokaryotic type
Helix-turn-helix
Other families
DPRO_3532
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
GAF_2
AAA_5
AAA
AAA_2
AAA_16
Mg_chelatase
HTH_8
AAA_7
bpMoxR
AAA_22
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
SOB60448
UniProt:
A0A2C8FEW9
LinkDB
All DBs
Position
DPRO:3674657..3676276
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AA seq
539 aa
AA seq
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MSAERTFHFSNMEIQSLLLEMGEQRSTSSLFRLIVDRLSSFEEVSLARIWLIKEGDICSS
CLMAEECPSRELCLHLVASAGSPVHDSADWGRIDGTFQRFPMGVRKVGHIAATGLPVVVE
SIPDDSKWIAHPEWARKEGINGFAGQPIQFHGEILGVLAVFTKTRIEKPALDILNIIANH
TATALVNARAFEQIEDLKKQLEAENTYLREELVQASSYGGFIGRSLALQRIIQQIDLVAP
TDANVLVQGESGTGKEVVARELHQRSNRSDNALVKVNCASVPKELFASEFFGHVKGAFTG
AHANRVGKFGTANKGTLFLDEVGEIPLELQAQLLRVLQEGEYERIGEEKVRKVDVRIIAA
TNRDLQKEVEAGRFREDLYFRLNVFPITVPPLRARREDIAPLAEHFLKRSLQAMHRPALK
FRPEQLQQLHGYDWPGNVRELQNVVERFAISSIAGARHVDLLNDLGDEVTPSPASLDCVD
SDSVLTEEEMIRLQVRNIEKALERCNGKIYGPDGAANLLGIKPTTLSTRISKLNIRKKR
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccgagcgcacatttcattttagcaatatggaaatccaatcactgcttttggag
atgggtgaacagcgctcgacctcttccctctttcgcctcatcgttgaccgtctttccagc
tttgaagaagtctcccttgcccggatatggctcatcaaggaaggggatatctgctcgtca
tgtctcatggccgaggagtgtcccagcagggaactttgcctgcatctggtggccagcgca
ggaagtccggtgcacgactcagccgactggggtcgaatagacggcacctttcagcgcttt
cccatgggcgtgcgcaaggtgggacatattgcggccacgggactgcctgttgtggtggag
tccattcctgacgattccaaatggattgctcatcccgagtgggccagaaaggaagggatc
aatggttttgccgggcagcccatccagttccacggcgaaatccttggcgtgctggccgtc
ttcaccaagacccgtattgaaaagcctgccctggatatcctgaacatcatcgctaatcat
acggccaccgcactggtcaatgcccgggctttcgagcagatcgaggatctcaaaaaacag
ctggaagccgaaaatacctaccttcgcgaggagctggttcaggccagttcttacggcggg
ttcatcggtcgcagccttgccttgcagcgaatcattcagcagatcgatctggtggcaccc
accgatgccaacgtccttgttcagggcgagtcgggaaccggtaaggaagtcgtggcccgt
gaactgcatcagcgcagcaaccgcagtgacaatgcgctggtcaaggtcaactgcgcctcg
gtccccaaagagctgtttgccagcgaatttttcgggcacgtcaaaggggcgttcaccggt
gcccacgccaacagggtaggcaagttcgggacagccaataaagggacgctctttcttgat
gaagtgggtgaaatccccttggaactccaggcgcaactccttcgcgtccttcaggaagga
gagtatgagcgcatcggtgaggaaaaggttcgcaaggtggatgtacgcatcattgccgcc
actaatcgggatctgcaaaaggaagtggaggccggtcgattccgtgaagacctctacttc
cgcttgaatgtgtttccgatcacggttccaccgcttcgggccagacgcgaagatattgcg
ccccttgccgagcactttctcaagcggtccctgcaagccatgcatcgtcccgcattgaaa
ttccgtcctgagcagttgcagcagttgcatggctatgactggccgggcaatgtgcgtgaa
ttgcagaatgtggttgagcgcttcgccatttcatccattgccggagcgcgtcacgtggat
ttgctcaacgacttgggtgatgaggttacgccatctccagcctctcttgattgcgtggat
tccgattcggttttgaccgaagaggaaatgatccggttgcaggtgcgcaatatcgagaag
gcactggaacgctgcaatggcaaaatctacgggccggatggtgccgccaacctccttgga
atcaagccgaccaccttgtcgacccgtatcagcaagctgaacatccgaaaaaaacggtag
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