KEGG   Pseudodesulfovibrio profundus: DPRO_3577
Entry
DPRO_3577         CDS       T05258                                 
Name
(GenBank) Type I site-specific deoxyribonuclease, HsdR family
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
pprf  Pseudodesulfovibrio profundus
Brite
KEGG Orthology (KO) [BR:pprf00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:pprf02048]
    DPRO_3577
Enzymes [BR:pprf01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     DPRO_3577
Prokaryotic defense system [BR:pprf02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   DPRO_3577
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N T1R_D3-like ResIII
Other DBs
NCBI-ProteinID: SOB60493
UniProt: A0A2C8FDJ1
LinkDB
Position
DPRO:complement(3727777..3731070)
AA seq 1097 aa
MHQTPETREEYSAKIPALQILTNLGWTYVSPTECMSKRGSNREVLLKDELVRFLQARQFD
WNGERHHLSPNAIEQIIRELSSPGLNEGLLTANERIYDKLTLGITVKEFINGKAVQPTIP
IIDWNNPENNLFTVTEEMEVISSGGTHKRIPDLVCFVNGIPLVVIEAKRPESGNPNKSML
DEGVSQSIRNQKKDEIPQLFCYAQLLLAISNTEGRYGTTMTPKKFWATWREEELDDAVFH
EVKNTPLSDVAKDAIFTDRPAKMRIYFESLWSQDVLPTDQDRLLISLLKKDRLLEMIKYF
IIFDKRVGKIVARYQQAFGIKSMLERVKELDDKGGREGGVIWHTTGSGKSFTMVFLSKAL
LLEPELRDCRVIIVTDRVDLEKQLSKTFLSGGAYGSAVAAKKEGAKAKVRSGRDLAKRIG
KGTDRIIFTIIDKFSTASKLSECYNPSDKIIVLIDEGHRSTGGETFERMRTVLPNASYIA
FTGTPLLKGDKTENKFGRIIHSYTMQRAVEDGTVTPLLYEERRPELDVNESAIDNWFEKI
TARLTDEQRTDLKKKFANKGAVYGSENRIELIAWDIATHFADNIKALGMGLKGQLATDSK
LSAIRFKKYLDETGLVSSAVIISPPDTREGHSDVNESNLPEIQQWFKDTVGNAANAEQYE
RETIEAFGTDEGVDILIVVDKLLTGFDEPKNTVLYIDKPLKEHNLLQAIARVNRLHEAKD
FGLLIDYRGILKELDTTLKQYQDLQERTQGGFDVDDIDGLYQQVGTEYKKLPMLNERLWG
IFKDVQNKQDLEQYRQVLIPQFIEEEDGVTTDTRQKVREDFYQALTEYGLCLKVALASRS
FYEDGSFSEKDISRYKADLRFFTNLRKIVRQDAQETVDYSAYEEQIRRLVDKHVVGDSIQ
ESEGVILVDDMSKDDDPKNWTKEKTRNETDIIRTRVKKTIEQELGDDPYAQKVFSELLRE
AIAQAEKMFDHPNKQFELFEEFEAQVKRRSGLGIPKELDESETAKAYYGTFRLILGEDHF
QTIELEEEQKLIEEAITIDSIVGNAVAEHSLNPQSMESSIKAGILPSLFKLIGLDKAKDV
IEHIIQITRVRLSNGNR
NT seq 3294 nt   +upstreamnt  +downstreamnt
atgcaccagacacccgaaaccagagaagaatacagcgcaaagataccagccctccaaatt
ctcaccaaccttggctggacatacgtttccccaaccgaatgcatgagcaagcgcgggtca
aaccgagaagtgttgcttaaggatgaactggtaaggttcctccaggcccgtcaatttgat
tggaacggagaacggcaccacctatcccctaacgccatcgagcaaatcatccgggaactg
tcttcgccgggactgaatgaaggactactcaccgctaacgaacgcatttacgacaagctg
acacttgggatcactgtaaaagaattcatcaacggtaaggcggtgcaaccgaccatcccg
atcatcgattggaacaatccagagaacaacctgttcaccgtgacagaagaaatggaagtc
atctcatccggcggtacccataaacgcatccccgaccttgtgtgtttcgtgaatggtatt
ccgctggtggtcattgaggcaaagcggcccgaatccggcaacccgaataagtccatgctg
gacgaaggtgtaagtcagtccatccgcaaccagaagaaggacgagataccgcagctcttc
tgctacgcacagcttttgctggctatcagcaacaccgaaggacgctacgggacgaccatg
accccgaagaagttctgggccacatggcgtgaagaggaactggatgacgctgtattccat
gaagtaaaaaacacacctctgtcggacgtagccaaggacgctatcttcactgaccgcccc
gccaagatgaggatttattttgaatcactctggtcacaggatgtgctgcctacagatcag
gataggttgctcatcagtctgttgaagaaagaccgactgcttgagatgatcaaatacttc
atcatctttgataagcgtgtcggcaaaatcgtggcccggtatcaacaagcatttggtatc
aagtccatgctggagcgggtgaaggaactggatgacaagggaggtcgtgaaggcggtgtt
atctggcacactaccggatccggcaaatcgtttaccatggtctttctgagtaaagctctt
ctcctagaacccgaactccgagactgccgggtgattatcgtaacagaccgggtggacctt
gagaaacagctttccaaaaccttcctttccggcggtgcatatggttcagccgttgcagcc
aagaaggaaggagctaaagcaaaggttcgttcgggccgagaccttgccaagcgtataggc
aaaggcactgatcggatcatcttcaccattatcgacaagttcagcaccgcttccaagctg
tctgagtgctacaacccaagcgacaaaatcatcgtcttgattgacgagggccaccgcagc
actggcggcgagacattcgaacggatgcgcacggttcttcctaatgcctcatatatcgca
ttcacaggcacaccgcttctgaagggagacaaaacggagaacaagtttggccgcataatc
cactcgtacacgatgcaacgagcagttgaagatgggaccgttaccccactgctctatgaa
gaacgccgccccgaactggatgtaaacgaatcagccatcgacaattggttcgaaaagatc
accgcccgactcactgacgagcagcgaacggacctcaaaaagaagttcgccaacaagggt
gctgtgtatggctctgagaatcgtatcgaactcattgcctgggatattgcgacccatttt
gcagacaacataaaagcactcggtatgggcctgaaaggtcagttggctacagactcaaaa
ctctcagcgatccgtttcaagaagtatctggacgaaacaggactcgtatccagcgcggtg
ataatatcaccgccagacacacgggaaggccattcagatgtcaacgaatcaaatctgccg
gaaatccagcagtggttcaaagacaccgtgggcaatgctgccaatgccgagcaatacgaa
cgagagactatcgaggcatttggtacagacgaaggtgtcgatatcctgatcgtggtggac
aagctactcacaggatttgatgaaccgaaaaacactgtcctctacatcgacaagccactg
aaggagcataatctgcttcaggctatcgcccgtgtgaaccgcctccatgaagccaaggac
ttcggacttctcatcgactaccggggcatcctcaaagaactggataccacgctgaagcaa
tatcaggacttgcaggaacgcacccaaggcgggtttgacgtggacgacatcgacggactc
taccagcaggtcgggaccgagtataaaaagttgcccatgctcaacgaacgtctttggggc
atttttaaggatgtgcaaaacaagcaggacctggagcaataccgacaggtacttatccct
cagttcatcgaggaagaagatggagtcaccacagacacccgccaaaaagttcgtgaggac
ttctaccaagctctcacagagtatgggctatgcttgaaggtggccctagcctcccgctcc
ttttacgaagatggcagcttcagtgaaaaggatatttcacgatacaaagcagaccttcgt
ttcttcaccaacttgagaaagatcgtcaggcaggatgctcaggaaaccgttgactacagc
gcatacgaagaacagattcgccgcctcgtggataagcacgttgtaggcgattccatccag
gagtccgaaggagtcattctcgttgatgatatgagcaaagacgatgacccaaagaactgg
accaaggaaaaaacccgcaacgaaacagacatcatccgcacacgggtcaaaaagaccatt
gaacaagagcttggggatgatccgtatgcccaaaaggtgttctctgagctgctgcgtgaa
gcaattgcacaggccgagaagatgtttgaccatcccaacaagcagttcgaactttttgaa
gagtttgaagcacaagtaaagagacgttcgggcctgggtatccccaaagaactcgatgaa
agcgaaacagcgaaagcatattatggcaccttccggcttatccttggtgaagaccatttc
caaaccattgaactggaagaagaacaaaaactcatcgaggaagccatcactatcgattca
attgtcggtaatgctgtggcagagcattcgctgaatccgcaatcaatggagtcctccatc
aaggccggaatcttgccaagcctgttcaagctcatcgggttggataaagcgaaagatgtc
attgaacacatcatccaaataacgcgagtccgtttgtccaatgggaacagatag

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