Pseudodesulfovibrio profundus: DPRO_3822
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Entry
DPRO_3822 CDS
T05258
Symbol
rlpA
Name
(GenBank) Endolytic peptidoglycan transglycosylase RlpA
KO
K03642
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
pprf
Pseudodesulfovibrio profundus
Brite
KEGG Orthology (KO) [BR:
pprf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pprf01011
]
DPRO_3822 (rlpA)
Enzymes [BR:
pprf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
DPRO_3822 (rlpA)
Peptidoglycan biosynthesis and degradation proteins [BR:
pprf01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
DPRO_3822 (rlpA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPBB_1
SPOR
Motif
Other DBs
NCBI-ProteinID:
SOB60739
UniProt:
A0A2C8FFU2
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All DBs
Position
DPRO:3966136..3966900
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AA seq
254 aa
AA seq
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MRYLIALFAIVTVLAMTGCASVNPFPKRVYSTPPSKTPSQAPGSFDPKTNPYTVFGRTYY
PLKSAEGYDEVGIASWYGKDFHGKKTANGRIYNMYGVSAAHKTLPLGTQVRVTNLENRRS
VVLVINDRGPFVGERIIDLSYGAAQKLDTVQRGVAKVRVTAIGTIPAARTTTVKAATSPQ
YFHVRVGAFADKNNAVRTYHRLVSIGYKDAVINTVRRNGQTLHVVQAGSFSDRNKAERVR
RRLLSDFPTCYITS
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgcgttacctcatagctctgtttgccatagtcacggtgttagccatgacgggctgcgcg
tctgtcaatccattcccgaaacgtgtgtactccacgccaccgtcaaagacgccctcgcag
gctcccggcagtttcgacccaaaaaccaatccctacaccgtgttcgggcgcacatactat
ccgctcaaatcagcagaagggtatgatgaggtcggtatcgcgtcatggtacggaaaagat
tttcacgggaaaaaaacagccaatggccgtatctacaacatgtacggtgtgtccgctgcg
cacaagacactgcctcttggcacacaggtccgggtgaccaaccttgagaacaggcgaagc
gtcgtgctggttatcaacgatcgcgggccgtttgtgggggaacggatcattgatctgtcg
tatggtgccgcgcaaaagctggataccgtccagcgcggtgtggcgaaagttcgtgtaacg
gccatcgggaccatcccggcggcgcgaaccacaaccgtcaaggcagcaacttctccccaa
tattttcatgttcgcgtcggagcctttgccgacaagaacaatgcggtgaggacgtatcac
cgcctggtctccattggctacaaggacgctgttatcaataccgtccggcgaaacggacag
accctccatgtcgtacaggccgggagtttctcggatcgaaacaaggcggaacgcgtccgg
cggcggctcttgtccgatttccccacgtgctacatcaccagttga
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