Pseudodesulfovibrio profundus: DPRO_3846
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Entry
DPRO_3846 CDS
T05258
Symbol
msbA
Name
(GenBank) Lipid A export ATP-binding/permease protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
pprf
Pseudodesulfovibrio profundus
Pathway
pprf02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pprf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
DPRO_3846 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pprf02000
]
DPRO_3846 (msbA)
Enzymes [BR:
pprf01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
DPRO_3846 (msbA)
Transporters [BR:
pprf02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
DPRO_3846 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
RsgA_GTPase
AAA_30
DEAD
nSTAND3
ABC_ATPase
IstB_IS21
AAA_16
NB-ARC
AAA_24
Zeta_toxin
DUF3584
AAA_29
DUF5003
HUTI_composite_bact
AAA_33
NACHT
MobB
nSTAND1
TsaE
Motif
Other DBs
NCBI-ProteinID:
SOB60763
UniProt:
A0A2C8FDN3
LinkDB
All DBs
Position
DPRO:complement(4000157..4001959)
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AA seq
600 aa
AA seq
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MSKNKYNLNNLETFDNKYLLKRCLSYFLPHKGKVLIGFLSIFAVSGANAGTAYLVKPAMD
EMFINQDRTALLLIPIGFFALIVGKGIFRFLQSYLMNMTGYLVLEQLRNDMFKKIVHLPL
SYFEESQVGMLMSRILGDVAEVRNSIPAVVMLIREFITCFGLLGVILYMNWKLAIWAAIT
LPLTIYPIILFGKKLRKLGRKMQIQSADINSLTQERLSGIRVIKAFNMENEETRNFYDES
HNIVRLSKKQILYSEISTRIMELIGGLAASLVLWYGGKQVLDGVGTPGTFFSFMASLIML
YDPIKKINNSNKTIQRSLASAERVFSLLDSPEVTREESGKVQFNESFEGLEIKDLNFAYP
STSNLVIKNLSLDVKKNQQVALVGHSGSGKTTLANLIPKFYEITDGDILINGTSIKEYDI
GTLRRSIGIVSQDTFLFNKSIRDNIAYGNADVDQSVVETAAQAAYAHEFIVDLPNGYDTV
VGERGVKLSGGQKQRLTIARALVKNPPLLILDEATSALDTKSERIVQKALENLMSDRTSI
VIAHRLSTVINSDRIVVMQNGEIVDVGTHEELLERCDYYKVLYTEQFTKQSSVDAETVTD
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaaacaaatacaatctcaacaacttagaaacttttgacaataaatacctgctc
aaacggtgtctttcatatttcctgccacacaaaggaaaggtccttatcggcttcctctcc
atttttgcagtatcaggagcaaacgccggcacggcctatctggtcaaaccggccatggat
gaaatgttcatcaatcaggacagaactgccctcctcctgatccccatcggtttttttgcc
ctcatcgtcggcaaaggtatctttcgttttctgcaatcctacctgatgaatatgaccggc
taccttgttcttgagcaactgcgaaatgatatgttcaagaaaattgtccacctgcctctc
agctacttcgaggaatcacaggtcggcatgttgatgtcgcgcatacttggcgacgtggct
gaagtcaggaatagtattcctgctgtggttatgcttatccgggaattcatcacctgcttc
ggcctgcttggcgtcatattgtatatgaattggaagctggcgatatgggcagcaatcaca
ttgcctttgacgatttatcccatcattcttttcggtaaaaaattacgcaagctgggcaga
aaaatgcaaatacagtctgctgacatcaactcgctgacccaggagcgcctttccggtatt
cgcgtcattaaggctttcaacatggaaaatgaggaaacgcggaacttttacgacgagagc
cacaacatcgtccgcctttccaaaaagcagattctctatagcgaaatttcaaccagaatc
atggaactgatcggtggcctcgctgcaagcctcgtgctttggtatggcggcaagcaggta
ctcgacggtgtcggaactcccggaacctttttctccttcatggcctcgctgatcatgctg
tatgatccaatcaagaagatcaacaactcgaacaagaccattcagcgctcactggcgagt
gccgaacgtgtattcagtctgctcgattctccagaagtaaccagagaagaaagcggaaaa
gttcaattcaatgagtcgtttgaaggacttgaaatcaaggacctgaactttgcctatcct
tccacatcaaacctggtcatcaaaaacctgtcacttgatgtaaagaagaatcagcaggtt
gccctcgttgggcatagcggttccggcaaaacaacactggcgaaccttatacccaagttt
tacgagatcaccgatggagacatcctgataaatggtacttccatcaaggagtacgacatc
ggcacgctgcgtcgcagtatcggtatcgtttcccaggataccttccttttcaataagtcc
atccgtgacaacatcgcctacggaaatgcagacgttgatcaatccgtagtggaaacggct
gctcaggcagcgtatgcgcacgaattcattgtggatctccctaacggatacgacacggtt
gtcggtgagcgcggcgtcaagctgtccggtggacagaagcagcgattgaccattgcccga
gcactggtcaagaacccgccactgctcatcctcgacgaggctaccagtgcgctggacacc
aagtccgagcgaattgtccagaaagcacttgagaatctcatgagcgaccgtacttccatc
gtcattgcccatagactctcaactgtcatcaactcggacagaatcgttgtcatgcagaat
ggcgaaatagtcgatgtcggcacccatgaggaactcctggagcggtgcgattattacaaa
gtgctctacacggaacaattcacgaagcaatcctcggtggatgcggagacagtcacggat
taa
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