KEGG   Pseudodesulfovibrio profundus: DPRO_3846
Entry
DPRO_3846         CDS       T05258                                 
Symbol
msbA
Name
(GenBank) Lipid A export ATP-binding/permease protein MsbA
  KO
K11085  ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
Organism
pprf  Pseudodesulfovibrio profundus
Pathway
pprf02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:pprf00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    DPRO_3846 (msbA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:pprf02000]
    DPRO_3846 (msbA)
Enzymes [BR:pprf01000]
 7. Translocases
  7.5  Catalysing the translocation of carbohydrates and their derivatives
   7.5.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.5.2.6  ABC-type lipid A-core oligosaccharide transporter
     DPRO_3846 (msbA)
Transporters [BR:pprf02000]
 ABC transporters, eukaryotic type
  ABCB (MDR/TAP) subfamily
   ABCB-BAC subgroup
    DPRO_3846 (msbA)
SSDB
Motif
Pfam: ABC_membrane ABC_tran SMC_N AAA_22 RsgA_GTPase AAA_30 DEAD nSTAND3 ABC_ATPase IstB_IS21 AAA_16 NB-ARC AAA_24 Zeta_toxin DUF3584 AAA_29 DUF5003 HUTI_composite_bact AAA_33 NACHT MobB nSTAND1 TsaE
Other DBs
NCBI-ProteinID: SOB60763
UniProt: A0A2C8FDN3
LinkDB
Position
DPRO:complement(4000157..4001959)
AA seq 600 aa
MSKNKYNLNNLETFDNKYLLKRCLSYFLPHKGKVLIGFLSIFAVSGANAGTAYLVKPAMD
EMFINQDRTALLLIPIGFFALIVGKGIFRFLQSYLMNMTGYLVLEQLRNDMFKKIVHLPL
SYFEESQVGMLMSRILGDVAEVRNSIPAVVMLIREFITCFGLLGVILYMNWKLAIWAAIT
LPLTIYPIILFGKKLRKLGRKMQIQSADINSLTQERLSGIRVIKAFNMENEETRNFYDES
HNIVRLSKKQILYSEISTRIMELIGGLAASLVLWYGGKQVLDGVGTPGTFFSFMASLIML
YDPIKKINNSNKTIQRSLASAERVFSLLDSPEVTREESGKVQFNESFEGLEIKDLNFAYP
STSNLVIKNLSLDVKKNQQVALVGHSGSGKTTLANLIPKFYEITDGDILINGTSIKEYDI
GTLRRSIGIVSQDTFLFNKSIRDNIAYGNADVDQSVVETAAQAAYAHEFIVDLPNGYDTV
VGERGVKLSGGQKQRLTIARALVKNPPLLILDEATSALDTKSERIVQKALENLMSDRTSI
VIAHRLSTVINSDRIVVMQNGEIVDVGTHEELLERCDYYKVLYTEQFTKQSSVDAETVTD
NT seq 1803 nt   +upstreamnt  +downstreamnt
atgagtaaaaacaaatacaatctcaacaacttagaaacttttgacaataaatacctgctc
aaacggtgtctttcatatttcctgccacacaaaggaaaggtccttatcggcttcctctcc
atttttgcagtatcaggagcaaacgccggcacggcctatctggtcaaaccggccatggat
gaaatgttcatcaatcaggacagaactgccctcctcctgatccccatcggtttttttgcc
ctcatcgtcggcaaaggtatctttcgttttctgcaatcctacctgatgaatatgaccggc
taccttgttcttgagcaactgcgaaatgatatgttcaagaaaattgtccacctgcctctc
agctacttcgaggaatcacaggtcggcatgttgatgtcgcgcatacttggcgacgtggct
gaagtcaggaatagtattcctgctgtggttatgcttatccgggaattcatcacctgcttc
ggcctgcttggcgtcatattgtatatgaattggaagctggcgatatgggcagcaatcaca
ttgcctttgacgatttatcccatcattcttttcggtaaaaaattacgcaagctgggcaga
aaaatgcaaatacagtctgctgacatcaactcgctgacccaggagcgcctttccggtatt
cgcgtcattaaggctttcaacatggaaaatgaggaaacgcggaacttttacgacgagagc
cacaacatcgtccgcctttccaaaaagcagattctctatagcgaaatttcaaccagaatc
atggaactgatcggtggcctcgctgcaagcctcgtgctttggtatggcggcaagcaggta
ctcgacggtgtcggaactcccggaacctttttctccttcatggcctcgctgatcatgctg
tatgatccaatcaagaagatcaacaactcgaacaagaccattcagcgctcactggcgagt
gccgaacgtgtattcagtctgctcgattctccagaagtaaccagagaagaaagcggaaaa
gttcaattcaatgagtcgtttgaaggacttgaaatcaaggacctgaactttgcctatcct
tccacatcaaacctggtcatcaaaaacctgtcacttgatgtaaagaagaatcagcaggtt
gccctcgttgggcatagcggttccggcaaaacaacactggcgaaccttatacccaagttt
tacgagatcaccgatggagacatcctgataaatggtacttccatcaaggagtacgacatc
ggcacgctgcgtcgcagtatcggtatcgtttcccaggataccttccttttcaataagtcc
atccgtgacaacatcgcctacggaaatgcagacgttgatcaatccgtagtggaaacggct
gctcaggcagcgtatgcgcacgaattcattgtggatctccctaacggatacgacacggtt
gtcggtgagcgcggcgtcaagctgtccggtggacagaagcagcgattgaccattgcccga
gcactggtcaagaacccgccactgctcatcctcgacgaggctaccagtgcgctggacacc
aagtccgagcgaattgtccagaaagcacttgagaatctcatgagcgaccgtacttccatc
gtcattgcccatagactctcaactgtcatcaactcggacagaatcgttgtcatgcagaat
ggcgaaatagtcgatgtcggcacccatgaggaactcctggagcggtgcgattattacaaa
gtgctctacacggaacaattcacgaagcaatcctcggtggatgcggagacagtcacggat
taa

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