Pseudodesulfovibrio profundus: DPRO_3897
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Entry
DPRO_3897 CDS
T05258
Symbol
clpB
Name
(GenBank) protein disaggregation chaperone
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
pprf
Pseudodesulfovibrio profundus
Brite
KEGG Orthology (KO) [BR:
pprf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pprf03110
]
DPRO_3897 (clpB)
Chaperones and folding catalysts [BR:
pprf03110
]
Heat shock proteins
HSP100
DPRO_3897 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
ClpB_D2-small
Clp_N
AAA_5
AAA_22
AAA_16
ATPase_2
AAA_14
Sigma54_activat
nSTAND3
IstB_IS21
NACHT
TniB
AAA_7
AAA_18
RNA_helicase
AAA_24
Zeta_toxin
NBD_SMAX1
T2SSE
Lipocalin_8
LonB_AAA-LID
Motif
Other DBs
NCBI-ProteinID:
SOB60816
UniProt:
A0A2C8FEF8
LinkDB
All DBs
Position
DPRO:4047965..4050562
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AA seq
865 aa
AA seq
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MDPNTFTKKTQDAVSEAQSMAIRNGHQQIDCEHLLHALVTQEQGLVPQILRKLGVAADAY
LGAVDAEITKIPKVSGPGARPDQILVTQRLQKVLVAAGDQSKRMKDEFVSVEHVFLALMD
EPSSTGVGRVNKQFNIDKDKVLAVLNEVRGKQRVTSDNPEATYDSLKKYGRDLVEEARSG
KLDPVIGRDSEIRRVIRILSRRTKNNPVLIGEAGVGKTAIAEGLAQRIVAEDVPEGLKEK
TVFSLDMSALIAGAKYRGEFEERLKAVLKEVQESAGQIIMFIDELHTIVGAGKTDGAMDA
GNILKPMLARGELHCIGATTTDEYRKYIEKDPALERRFQTVSVDEPTVEDTISILRGLRE
RFEVHHGVRISDGAVVEAAVLSNRYITDRQLPDKAIDLIDEAAALIRTEIDSQPYELDKV
NRQIMQLEIEREALKRETDDASKERLHKLEVDLGDFKEKQAALLAQWENEKSGIERLRSL
KEEIESTRREIEEAKRVHDYNRAAELEYGTLATLEKDLNERNAAFESGDTPRMVKEEVGP
DDVAQVIARWTGIPVSRLLEGEREKLLRLADVLHERVIGQDAAVQAVADAVLRARAGLKD
PSRPIGSFIFLGPTGVGKTELCKTLASALFDSKDNMIRLDMSEYMEKHTVARLIGAPPGY
VGYDEGGQLTEAVRRKPYSVVLFDEIEKAHHDVFNVLLQILDDGRLTDSHGRTVDFKNTI
VIMTSNLGAEYMLDGIDNSGEFMEGVEDKVRDVLRRHFRPEFLNRVDATVLFRPLLKDQL
IQIIDLLLAGLSSRLADRKIELILTDGAKRFIADGAYDPNFGARPLHRYLQSHLETPLAR
KLIGGELMDGDTVTVDEKGGELVFE
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atggatcccaatactttcaccaaaaaaacgcaggatgccgtttccgaagcccagagcatg
gctattcggaatgggcatcagcaaatagactgtgaacatctgctgcacgcccttgtgacg
caggagcagggacttgtcccgcaaatcctgcgcaagctgggtgttgccgccgacgcatac
cttggtgccgtggacgcggaaatcaccaagattcccaaagtctccgggccgggcgcacgt
cctgatcagattctggtaacccagcgtctgcaaaaggtgcttgtggctgccggtgatcaa
tccaagcgcatgaaggatgagtttgtctctgttgagcacgttttcctggcgctcatggac
gagccgtcttccacaggcgtagggcgggtcaacaagcagttcaacatcgacaaggacaag
gtcctggctgtgttgaacgaggtgcgcggcaagcagcgtgtgacatctgacaacccggaa
gccacctatgattcgctcaagaaatacgggcgtgatctggtggaggaggcgaggtcgggc
aagctcgatccggtcatcggccgggattcggagatacgtcgtgtcattcgcatcctgtcg
aggcgcacaaagaacaacccggtgctcatcggtgaggccggtgttggtaagactgccatt
gccgaaggactggcccagcgcattgttgccgaggacgtgcccgaaggtttgaaggaaaag
accgtattcagcctcgatatgagcgcactcattgcgggtgccaagtatcgcggtgagttt
gaggaacgcctcaaggcggtactcaaggaggtgcaggagtctgccggacagatcatcatg
ttcattgatgagctgcacaccattgttggtgcaggcaagaccgacggcgcaatggatgcg
ggtaacatccttaagcccatgctggcccgtggagaactgcactgcattggtgcgacaacc
acggatgagtatcgtaaatatattgaaaaggacccggcactggaacggcgtttccagacg
gtctcagtggatgaacccactgtggaagataccatatcgatccttcgcggtttgcgtgaa
cgattcgaggtgcaccacggtgtgcggatttccgatggtgccgttgtggaagccgccgtc
ctgtcgaaccgatacatcacggatcgtcaactgccggacaaggccatcgacctcattgat
gaggccgcggccctgattcggacggagatcgactcgcagccgtatgaactggataaggtc
aaccgccagatcatgcagcttgaaattgagcgcgaagcactcaagcgtgagacggatgat
gcctccaaggagcgactccataagctggaagtcgacctgggagacttcaaggagaagcag
gctgcattgcttgcccagtgggaaaacgagaaatccggtatcgaacgcttgcgttcgctc
aaggaggaaatcgaatccacccgtcgtgagatagaggaagccaagcgggtgcatgattac
aaccgtgcggccgagttggaatacggtacgcttgcgacactggaaaaagatctgaatgaa
cgaaacgcggcctttgagtccggcgatacgcctcgcatggtcaaggaagaggttggtccc
gatgatgtggcgcaggttattgcccgctggaccggcattcccgtctccagactgctggaa
ggcgaaagggaaaagctcctacgtctggccgatgtgctccatgagcgggttatcgggcag
gatgcagcggttcaggctgtagccgatgcagtgctgcgcgcccgtgccggtctgaaagac
ccctcgcgtcccattggctcgttcattttcctcgggcctacgggcgtgggtaagacggag
ctgtgcaagacacttgcttcagcgctctttgattcgaaggataacatgatccgcctcgac
atgtcggagtacatggagaagcatacggtggcccggctcatcggtgcgcctcccggctat
gtcggctatgatgagggcggtcagttgacggaagcggttcgccgcaagccgtactcggtg
gtgttgtttgatgagatagagaaggcgcaccatgacgtgttcaacgtcctgttgcagatt
cttgacgacgggcgtctgacggattcccacgggcgtaccgttgacttcaagaacactatc
gtcatcatgacatccaacctgggtgcggaatacatgctggatggcatcgataactcaggc
gagttcatggaaggtgtggaggataaagtgcgggatgtcctgcgcagacacttccgcccc
gagttccttaaccgcgtggatgccaccgtgctgttccgaccgcttctgaaggatcagctg
atccagattatcgatctgcttttggccggactcagttcaaggctggcggatcggaagata
gagttgattttgacagacggtgctaagcgtttcatcgccgatggtgcgtatgatccgaac
tttggtgctcgaccgttgcatcgctatctccagtctcaccttgagacgccgttggccagg
aagctgatcggtggagagctaatggacggcgacaccgtgactgtggatgagaaaggtggc
gaactcgttttcgagtaa
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