Pseudodesulfovibrio profundus: DPRO_PA0005
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Entry
DPRO_PA0005 CDS
T05258
Symbol
lipA
Name
(GenBank) Capsule polysaccharide modification protein LipA
KO
K07266
capsular polysaccharide export protein
Organism
pprf
Pseudodesulfovibrio profundus
Brite
KEGG Orthology (KO) [BR:
pprf00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
DPRO_PA0005 (lipA)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Capsule_synth
DUF354
MGDG_synth
Motif
Other DBs
NCBI-ProteinID:
SOB62129
UniProt:
A0A2C8FG13
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All DBs
Position
paDPRO:3349..5361
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AA seq
670 aa
AA seq
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MIGIFSRGMSRIPHLETLLGDEVRFRPGAPDGLSAIAGWGHKPTADKAKQMAAKWSLPYL
AVEDGFLRSLGLGVQGHAPLSIIVDDVGVYYDATGPSQLENMIRDRDFSDAELRLARKAI
EGIVANGVSKYNHAPELADDLPKNGCERVLLIDQTQNDASVKLGLADESTFLEMARAARE
EHPKAEILIKVHPDVTSGKKVGYLAEADLSNVTVIDYDVNPLSLLKQVDHVYTVSSQMGF
EALLRGVAVTCFGMPFYAGRGLTCDRLSLDRRSVGRSLEEVFAAAYICYARYLDPFTGQL
SGIMESVQILADQKRHNDRNRGDWVCAGFSWWRRGFASHLFKSTDGNILFENTAVTTAVT
AYDIGGRALVWSAKTPPGTWEACEDKDVTVIGVEDGFLRSTGLGSDFYWPYSLCMDSRGA
YFDPSGPSDLEVILKEKQFDEQLVERATALRKKIVASGITKYNVGLTKEQVPFDSGGRQV
VLVVGQVADDKSVELGGLGIASDRELLEAVRVNRPDAYLIYKPHPDVVSGNRDGGAFADE
GRNVYDVILTDVGLNALFPVIDELHTLTSLSGFEALLRGISVYTYGGPFYAGWGLTEDRL
DFPRRNRILALDELVAGVLILYPTYYDWRTEMFCGPEVVLQRLADGEEPRQGVVRRRMCR
ALQTVLNILP
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgattggtatcttctccaggggcatgagtcgcatcccacaccttgaaactttgctcggc
gacgaggtgcgttttcgccctggtgccccagatggtttgtcggctattgctgggtggggc
cacaagcccacggcagacaaagctaaacagatggccgcaaagtggagccttccgtatttg
gccgtggaagatggcttcttgcgctcccttggtttgggcgtacagggccatgcccctctt
tctattatcgtcgatgatgttggtgtttattatgatgctacaggcccttctcagctcgaa
aacatgatccgagatcgtgatttttccgatgcagaacttcgcttggcccgtaaggcgatt
gagggcattgtcgccaatggggtgagcaagtataatcatgctccagaactggctgacgat
ttgccgaaaaatgggtgcgaaagggtgcttctcatcgaccagacccaaaatgacgcttcc
gtcaagctggggttggccgacgaatcaacatttctggaaatggcccgtgcagcgcgggaa
gaacaccctaaagctgagattctgatcaaagtacacccggatgtcacttcggggaagaag
gtgggctatttggccgaggctgatttgtccaacgtgacggtcatcgattacgatgtgaat
cccctttccctgctcaaacaggtggaccatgtttatactgtgagttcgcaaatggggttc
gaggcactgcttaggggggtggcggttacctgcttcgggatgccgttttatgccggacgg
gggctgacctgtgacaggttatcacttgaccggcgatctgtcggacgatccctggaagaa
gtttttgccgcagcatatatctgctatgcgaggtacctagatccctttaccgggcagctt
tctggaatcatggagtctgtccagatccttgctgatcagaaacgtcacaatgaccggaat
cgaggcgattgggtttgtgccggtttctcctggtggcgcagggggtttgcttcacatcta
ttcaagtccacggacggcaatattctctttgaaaacacagccgtaaccacggctgtcacc
gcctacgatattggcggaagagccttggtttggtctgcgaaaacaccgcccggaacgtgg
gaggcgtgtgaagacaaggatgttacggtgatcggtgtagaagatggtttcctccgttcc
acagggcttggttcggatttttactggccttactcgctctgtatggattcgaggggagct
tactttgatccgtctggccctagcgacctagaagtcattctcaaagagaaacagtttgat
gaacaacttgttgaacgggccacggcgttgcgaaagaagattgttgccagtggtatcact
aaatacaatgttgggttaacgaaagagcaggtccctttcgattcgggcggtcggcaagtg
gttctggttgtggggcaagtcgcggatgacaaatcggtggaattgggcggattgggcata
gcttctgatcgggagttgcttgaagctgtccgggtgaatcgacctgacgcctacttgatt
tataaaccgcacccggatgtggtcagcggtaatcgtgatggtggtgctttcgctgacgag
ggtcgaaatgtctatgacgttattttaacggatgtcggcctgaacgcgcttttccctgtc
attgatgaattgcatacgctgacatcattgtctggttttgaggccttgctgaggggcatt
tcagtgtatacgtatggcggccctttctacgcgggatggggactgacggaagatagatta
gattttcccagacgaaaccgcattttggctttggatgaacttgtcgctggggtgttaatc
ctgtatccaacctactatgattggcgaacagaaatgttttgcggccccgaagttgtcctg
caaaggctggctgacggcgaagaacctcgtcagggagtcgtgaggcggcgcatgtgcaga
gccttacagacggtactcaatatattgccatag
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