Pseudomonas promysalinigenes: HU725_020850 Help Entry HU725_020850      CDS       T07662                                  Symbol ligB Name (GenBank) NAD-dependent DNA ligase LigB   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism pprg  Pseudomonas promysalinigenes Pathway pprg03030   DNA replication pprg03410   Base excision repair pprg03420   Nucleotide excision repair pprg03430   Mismatch repair Brite KEGG Orthology (KO) [BR:pprg00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     HU725_020850 (ligB)    03410 Base excision repair     HU725_020850 (ligB)    03420 Nucleotide excision repair     HU725_020850 (ligB)    03430 Mismatch repair     HU725_020850 (ligB)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:pprg03032]     HU725_020850 (ligB)    03400 DNA repair and recombination proteins [BR:pprg03400]     HU725_020850 (ligB) Enzymes [BR:pprg01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      HU725_020850 (ligB) DNA replication proteins [BR:pprg03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      HU725_020850 (ligB) DNA repair and recombination proteins [BR:pprg03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      HU725_020850 (ligB)    NER (nucleotide excision repair)     GGR (global genome repair) factors      HU725_020850 (ligB)    MMR (mismatch excision repair)     DNA ligase      HU725_020850 (ligB)   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       HU725_020850 (ligB) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  OB_DNA_ligase DNA_ligase_aden HHH_5 HHH RecR_HhH RNA_ligase DUF3701 Xre-like-HTH Motif Other DBs NCBI-ProteinID:  QXI33425 LinkDB All DBs Position 4593353..4595020 Genome browser AA seq 555 aa AA seqDB search MPLLLVLLLFMPLKTHATGCPNWSAERAHAEVTRLHETVRRWDDHYHRLGQSLVPDQVYD QSRQRLVHLQGCFALPSELNSLASARGPIAHPIRHTGVAKLSDERAVAQWMRGKAEVWLQ PKVDGVAVTLVYRQGRLVQLLSRGDGINGHDWSRHIDSLQRLNHPLTHPLDLTLQGELYL HLDHHVQAQAGSVNARATVAGLLARKQLSGEQGLGIALFVWDWPQGPRDQGERMARLAAL GFSDSQRLSVSIGTAAEAEQWRQHFYRTALPFATDGVILRQNARPAAERWEVNAPYWIAA WKYPITQALAEVRDVHFRIGRTGRVTPILKLQPVQFDDRLIAQVSLGSLARWRALEVGPG DHVVIGLAGLTIPRFEQVAHRAAERRSVKAPALDDYGPMTCWQATDHCEEQFVARLTWLS GKHGLAMPGTGPGTWRRLVRGGLVTSLADWLALDAEQLAELPGIGANSASRLQRSFELGR SRPFSQWVNGLGVPAPRAWSTQDDWATLASRSAAQWQALPGVGATRANQLEAFFAAEPVQ ELARQLAENGIAGFE NT seq 1668 nt NT seq  +upstreamnt  +downstreamnt atgccgctgctgctagtgttgctgctgttcatgccactcaagacccacgccacaggctgc ccgaactggtcggctgagcgggctcatgcagaggtcactcgcctgcatgaaacggtgcgc cgttgggacgaccactaccaccggctgggtcaatccctggtgccggaccaggtgtacgac cagagcaggcagcgccttgtgcacctgcaaggctgcttcgccctgccgagcgagctgaac tcgctggccagcgcacgtgggccgatcgcccaccccatccgtcatacaggtgtcgccaag ctctcggacgaaagggctgtggcccaatggatgcgaggcaaggccgaagtctggctgcaa cccaaggtggatggcgtcgcagtcaccctggtctaccgccaaggtcggctggtgcagctg ctcagccgtggagatggcatcaacggccatgactggagccggcatatcgactcgctgcag cgccttaaccatccactgacccacccattggacctgacattgcaaggcgagctttacctg catctggatcaccacgtacaggcacaggcaggcagcgtcaacgctcgcgccacggtcgca ggcttgttggcacgcaagcagctgagcggtgaacaaggcttaggcatcgccctgttcgtc tgggactggccgcaggggcccagggatcaaggcgagcgcatggcaaggttggccgccctg ggtttttccgacagccagcgcttgagtgtgtccatcggcactgccgccgaggcggagcag tggcgccagcacttttaccgcacagccctgccctttgccacggacggcgtgatcctgcgc cagaatgcaaggccagccgccgagcgctgggaggttaacgcgccctactggatcgcggcc tggaagtaccccattacccaggcgctggccgaagtccgtgacgtgcactttcgcattggc cgcactggcagggtcacccccattctgaaactacagccggtccagttcgatgaccgcctt atcgcgcaagtgagccttggctccctcgcacgctggcgggcgctcgaagttggcccgggg gaccacgtcgtcatcggcctggcggggctgaccatccctcgcttcgagcaggttgcacac cgcgccgccgagcgtcgcagcgttaaagcacctgcactcgacgattacggcccaatgaca tgctggcaagcgacggaccactgcgaagaacagttcgttgcgcgcctgacctggctcagt ggcaaacatggcctggccatgccgggcaccgggccaggcacctggcgacgactggtacgt ggcgggctggtgacatcgctggcagactggctggcgctggatgccgagcagttggccgag ctgccagggatcggcgccaacagcgccagccgcctgcagcgcagtttcgagcttggccgc agcagacccttcagccagtgggtcaacggccttggcgtgccggccccgcgcgcctggtcg acgcaggatgactgggcaaccctcgccagccgctccgccgcgcaatggcaagccctgcct ggcgttggcgctacccgcgccaaccagctagaggcgtttttcgcagctgagcctgtgcaa gagcttgcccggcaactggcggaaaatggcatagccggttttgaatga

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