KEGG   PATHWAY: pprl03060
Entry
pprl03060                   Pathway                                
Name
Protein export - Poeciliopsis prolifica (blackstripe livebearer)
Description
The protein export is the active transport of proteins from the cytoplasm to the exterior of the cell, or to the periplasmic compartment in Gram-negative bacteria. The sec dependent pathway is the general protein export system that transports newly synthesized proteins into or across the cell membrane. The translocation channel is formed from a conserved trimeric membrane protein complex, called the Sec61/SecY complex. The twin-arginine translocation (Tat) pathway is another protein transport system that transports folded proteins in bacteria, archaea, and chloroplasts. Many Tat systems comprise three functionally different membrane proteins, TatA, TatB, and TatC, but TatA and TatE seem to have overlapping functions, with TatA having by far the more important role.
Class
Genetic Information Processing; Folding, sorting and degradation
Pathway map
pprl03060  Protein export
pprl03060

Other DBs
GO: 0043952 0043953
Organism
Poeciliopsis prolifica (blackstripe livebearer) [GN:pprl]
Gene
129351236  [KO:K09540]
129357259  spcs1; signal peptidase complex subunit 1 [KO:K12946] [EC:3.4.-.-]
129358410  [KO:K10956]
129358451  [KO:K10956]
129358847  get1; guided entry of tail-anchored proteins factor 1 isoform X1 [KO:K22384]
129359336  srpra; signal recognition particle receptor subunit alpha [KO:K13431]
129359416  spcs2; signal peptidase complex subunit 2 [KO:K12947] [EC:3.4.-.-]
129360776  [KO:K03108]
129360780  [KO:K03108]
129362945  immp2l; mitochondrial inner membrane protease subunit 2 isoform X1 [KO:K09648] [EC:3.4.21.-]
129364186  sec11a; signal peptidase complex catalytic subunit SEC11A [KO:K13280] [EC:3.4.21.89]
129364436  immp1l; mitochondrial inner membrane protease subunit 1 [KO:K09647] [EC:3.4.21.-]
129364835  sec61g; protein transport protein Sec61 subunit gamma [KO:K07342]
129365220  srp14; signal recognition particle 14 kDa protein [KO:K03104]
129366173  srp19; signal recognition particle 19 kDa protein [KO:K03105]
129366538  hspa5; endoplasmic reticulum chaperone BiP [KO:K09490] [EC:3.6.4.10]
129367346  get3; ATPase GET3 [KO:K01551] [EC:7.3.2.7 7.3.-.-]
129369212  srp9; signal recognition particle 9 kDa protein [KO:K03109]
129369228  sec63; LOW QUALITY PROTEIN: translocation protein SEC63 homolog [KO:K09540]
129369386  tmem208; transmembrane protein 208 [KO:K27164]
129369925  srprb; signal recognition particle receptor subunit beta [KO:K12272]
129371312  sec61b; protein transport protein Sec61 subunit beta [KO:K09481]
129371958  ubl4a; ubiquitin-like protein 4A [KO:K23388]
129377447  srp54; signal recognition particle subunit SRP54 [KO:K03106] [EC:3.6.5.4]
129377566  get4; Golgi to ER traffic protein 4 homolog [KO:K23387]
129378041  sec62; translocation protein SEC62 [KO:K12275]
129379308  sgta; small glutamine-rich tetratricopeptide repeat-containing protein alpha [KO:K16365]
129379430  oxa1l; mitochondrial inner membrane protein OXA1L [KO:K03217]
129379964  bag6; LOW QUALITY PROTEIN: large proline-rich protein BAG6 [KO:K23390]
Reference
  Authors
Dalbey RE, Robinson C.
  Title
Protein translocation into and across the bacterial plasma membrane and the plant thylakoid membrane.
  Journal
Trends Biochem Sci 24:17-22 (1999)
DOI:10.1016/S0968-0004(98)01333-4
Reference
  Authors
Berks BC, Sargent F, Palmer T.
  Title
The Tat protein export pathway.
  Journal
Mol Microbiol 35:260-74 (2000)
DOI:10.1046/j.1365-2958.2000.01719.x
Reference
  Authors
Wexler M, Sargent F, Jack RL, Stanley NR, Bogsch EG, Robinson C, Berks BC, Palmer T.
  Title
TatD is a cytoplasmic protein with DNase activity. No requirement for TatD family proteins in sec-independent protein export.
  Journal
J Biol Chem 275:16717-22 (2000)
DOI:10.1074/jbc.M000800200
Reference
  Authors
Jongbloed JD, Martin U, Antelmann H, Hecker M, Tjalsma H, Venema G, Bron S, van Dijl JM, Muller J.
  Title
TatC is a specificity determinant for protein secretion via the twin-arginine translocation pathway.
  Journal
J Biol Chem 275:41350-7 (2000)
DOI:10.1074/jbc.M004887200
Reference
  Authors
Rapoport TA
  Title
Protein translocation across the eukaryotic endoplasmic reticulum and bacterial plasma membranes.
  Journal
Nature 450:663-9 (2007)
DOI:10.1038/nature06384
Reference
  Authors
Flower AM
  Title
The SecY translocation complex: convergence of genetics and structure.
  Journal
Trends Microbiol 15:203-10 (2007)
DOI:10.1016/j.tim.2007.03.001
Reference
  Authors
Osborne AR, Rapoport TA, van den Berg B
  Title
Protein translocation by the Sec61/SecY channel.
  Journal
Annu Rev Cell Dev Biol 21:529-50 (2005)
DOI:10.1146/annurev.cellbio.21.012704.133214
Reference
  Authors
Paetzel M, Karla A, Strynadka NC, Dalbey RE
  Title
Signal peptidases.
  Journal
Chem Rev 102:4549-80 (2002)
DOI:10.1021/cr010166y
Reference
  Authors
Paetzel M, Dalbey RE, Strynadka NC
  Title
The structure and mechanism of bacterial type I signal peptidases. A novel antibiotic target.
  Journal
Pharmacol Ther 87:27-49 (2000)
DOI:10.1016/S0163-7258(00)00064-4
Reference
  Authors
Ng SY, Chaban B, VanDyke DJ, Jarrell KF
  Title
Archaeal signal peptidases.
  Journal
Microbiology 153:305-14 (2007)
DOI:10.1099/mic.0.2006/003087-0
Reference
  Authors
Desvaux M, Hebraud M, Talon R, Henderson IR
  Title
Secretion and subcellular localizations of bacterial proteins: a semantic awareness issue.
  Journal
Trends Microbiol 17:139-45 (2009)
DOI:10.1016/j.tim.2009.01.004
Reference
  Authors
Nakatogawa H, Murakami A, Ito K
  Title
Control of SecA and SecM translation by protein secretion.
  Journal
Curr Opin Microbiol 7:145-50 (2004)
DOI:10.1016/j.mib.2004.01.001
KO pathway
ko03060   

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