KEGG   Poeciliopsis prolifica (blackstripe livebearer): 129351631
Entry
129351631         CDS       T09758                                 
Name
(RefSeq) TNF receptor-associated factor 2-like
  KO
K03173  TNF receptor-associated factor 2 [EC:2.3.2.27]
Organism
pprl  Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04010  MAPK signaling pathway
pprl04137  Mitophagy - animal
pprl04141  Protein processing in endoplasmic reticulum
pprl04210  Apoptosis
pprl04217  Necroptosis
pprl04621  NOD-like receptor signaling pathway
pprl04622  RIG-I-like receptor signaling pathway
pprl04920  Adipocytokine signaling pathway
pprl05132  Salmonella infection
pprl05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:pprl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    129351631
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    129351631
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    129351631
  09143 Cell growth and death
   04210 Apoptosis
    129351631
   04217 Necroptosis
    129351631
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    129351631
   04622 RIG-I-like receptor signaling pathway
    129351631
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    129351631
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    129351631
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    129351631
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pprl03019]
    129351631
   04121 Ubiquitin system [BR:pprl04121]
    129351631
Enzymes [BR:pprl01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     129351631
Messenger RNA biogenesis [BR:pprl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     129351631
Ubiquitin system [BR:pprl04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRAF proteins
    129351631
SSDB
Motif
Pfam: TRAF-mep_MATH MATH_2 TRAF_BIRC3_bd zf-TRAF TRAF2_zf TRAF3_RING zf-C3HC4 zf-RING_4 zf-C3HC4_2 Sina_ZnF zf-RING_5 zf-C3HC4_4 zf-RING_6 zf-C3HC4_5 MATH TRAFD1-XIAF1_ZnF zf_C2HC_14
Other DBs
NCBI-GeneID: 129351631
NCBI-ProteinID: XP_054876560
LinkDB
Position
Unknown
AA seq 568 aa
MAAQEPSPPSSLEGNKPGFPKKILANNLEDKHLCNSCQKILRRPLQAQCGHRFCSFCFNK
LVSSGPQKCSACIKEDLFEEPTSILKPGGAFPDNAARREVEALAAVCPNEGCTWTGTVRE
FEASHEGNCDFMIIMCPSCKELMRANEQERHNERECPERTLNCKYCKEPFLLKNIKAHDE
ICPKYPMICEGCAKKKIPREKYVDHIKFCSKFKTPCRFHVVGCDTSVEKEKIHDHERQCS
YEHLNLLLHFIMGIKVSLESLQPQTLEVASQKLQVLHQSLRELELKMSQLGGGGPAPVQG
ACALTLATSFTPLPSAMGAALELQLQSEKTKVAELSRRCQELELKVNTFENIVCVLNREM
ERSCTTMEAYNRQHRLDQDKIEILSNKVRQLERTVSLRDLSIVEMEGKMREMSAATYDGV
FIWKISDFTKKRQDAVAGRAPAMFSPAFYTSKYGYKMCLRIYLNGDGTGRGTHLSLFFVV
MRGHSDALLKWPFNQKVTLMLLDQNNREHIIDAFRPDISSSSFQRPVSDMNIASGCPLFC
PLSKLDSKNSYIRDDTIFIKAIVDLTGL
NT seq 1707 nt   +upstreamnt  +downstreamnt
atggctgcacaagagccgtctccaccatcttccctggaaggcaacaagccgggcttccca
aagaaaattctggccaacaacctggaggacaagcatctgtgcaactcgtgtcagaaaatc
ctgcggaggcccctgcaggcccagtgcggccaccgcttctgttcgttctgtttcaacaag
ctggtgagttctggaccacagaaatgcagtgcatgcatcaaggaggacttgtttgaggag
cccacctccattctcaagcctggcggtgcgttcccagacaacgcagctcggagagaggtg
gaggccttggcagcagtttgtcctaatgaaggatgcacatggactggaactgtcagagag
tttgaggcgagccatgagggcaactgtgacttcatgatcatcatgtgtccgtcgtgcaaa
gagctgatgagagccaacgaacaggagcgccacaacgagcgagagtgtccagagaggaca
ctgaactgcaaatactgcaaagagccgttcctcttaaagaacatcaaggctcatgatgaa
atctgcccaaagtacccaatgatctgtgaaggctgtgcgaagaaaaagatcccccgtgag
aagtatgtggaccatattaagttctgcagtaaatttaaaacaccatgcagatttcatgtt
gttggctgcgatacgtctgtggagaaggagaagatccacgaccatgagcggcagtgttca
tacgagcacctcaacctgcttctgcatttcatcatgggcatcaaggtgagtctggagagc
ctccaaccgcagaccttagaggtggccagccagaagctccaggtgctgcaccagtccctc
agagagctggagctgaagatgagccagctgggtgggggcggccctgctcccgtgcagggt
gcatgtgctctcaccctggccacgtccttcactccactgcccagcgccatgggtgctgct
ctggagctgcagctccagagcgagaagaccaaggtggccgagctgagccggcgctgtcag
gagctggagctgaaagtgaacacgtttgaaaacatcgtctgcgtcctgaaccgggagatg
gagcgttcctgcaccaccatggaagcctacaaccgtcagcacagactagaccaggacaaa
attgaaattctcagcaacaaggtccgacagctggaaaggacggtcagcctgagggacctg
tccatcgtggagatggaggggaagatgagggagatgtctgcagccacctacgatggagtc
tttatctggaagatctccgatttcaccaagaagaggcaggatgccgtggctggccgcgct
cctgctatgttctcccccgcgttttatacaagtaaatacggctacaagatgtgcttacga
atctacctgaatggtgacgggacgggccgtggcacacatctgtctctgttctttgtggtg
atgagaggacacagcgacgcactccttaagtggcctttcaatcagaaggttaccctcatg
ctgcttgaccagaacaacagggagcacataatcgatgccttccggcccgacatctcatct
tcgtccttccagaggcccgtcagcgacatgaacatcgccagcggctgcccgcttttctgt
cctctgtccaagctggactccaaaaactcctacattcgtgacgacaccatcttcataaag
gccatcgtcgacctcactgggctctag

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