Poeciliopsis prolifica (blackstripe livebearer): 129351945
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Entry
129351945 CDS
T09758
Symbol
irf5
Name
(RefSeq) interferon regulatory factor 5 isoform X1
KO
K09446
interferon regulatory factor 5
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
129351945 (irf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprl03000
]
129351945 (irf5)
Transcription factors [BR:
pprl03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
129351945 (irf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
129351945
NCBI-ProteinID:
XP_054876779
LinkDB
All DBs
Position
Unknown
AA seq
503 aa
AA seq
DB search
MLVVRCTKLFHTKSAEPEPGTEPRSQCSQRSAMSIQPRRIRLKPWLLAQVNSGRYPGLQW
LGSEQRLFQVPWKHATRNTPMSEEENTIFKAWAVETGKYQEGVDEPDPAKWKANLRCALN
KSREFRLWFDGTKETPLRPYKIYEVCDGTGAADGAEDDEEMPDLTELSINPRTELASFPP
FGSAQVIPMPLLPLTSDVQPRGSPADPGSFDPAGLQNLNPLSSTQPESMEASSMESVQSQ
SDHQNQQPCKYDLLSSVPLTDLDLKFWYRGRAMGSLTVSNPQGCRLYYGHLEPTPEQVDL
FGPVSLQQVLFPGTVEIQNQKQRFYTDALLDVMDRGLILEIQQQDIYAIRLCQCKVFWSG
PGMPELGPPNSMERERRIRVFSLNDFLQGLISFQKGEAANPPPFDVFFCFGEDWPDRKPR
EKKLIMVQVVPVVARILTEMFSGELAWSTDSIRLQISNPDVKDQTVEQFKELQRLLQNQL
GPTGPWAPVGSLEASTGFSMGTS
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgttggtggttcggtgcacaaaactgtttcacaccaaaagcgcagaaccggaaccaggt
accgagccaaggtcccagtgctcccagcgctccgccatgagcatccagccccgcaggatc
cgcctgaagccctggctgctggcccaggtgaacagcggcaggtatccgggtctgcagtgg
ctcggttcggagcagcggctctttcaggtcccgtggaaacacgcgacccgcaacacgccg
atgtcggaggaggagaacaccatctttaaggcgtgggccgtggagaccgggaagtaccag
gagggtgtggacgaaccggacccggccaagtggaaggcgaacctgcgctgcgcgctcaac
aagagccgtgagttccggctctggttcgacggaaccaaggagacgccgctccgcccctac
aagatctacgaggtctgcgacggaaccggcgccgcagatggagccgaggacgatgaggag
atgccggacctcaccgagctctccatcaaccctcggaccgagctcgcctcttttccgccc
ttcgggtcggcccaggtgatcccgatgccgctgctgcccctgacctctgacgtccagcct
cggggttcaccggcggacccggggagcttcgacccggccggactccagaacctgaaccct
ctgtcctccactcagccagaatccatggaggccagcagcatggagtccgtccagagccag
tcggatcatcagaaccagcagccctgcaagtacgacctgctgagcagtgtcccattaaca
gatctggacctgaagttctggtaccggggccgggccatgggctccctgacggtcagcaac
ccccagggctgccggctctactacggccacctggaaccgacgccggagcaggtggacctg
ttcggtccagtcagtctgcagcaggttctgttcccgggaacggtggagatccagaaccag
aagcagcgtttctacacggacgctctgctggatgtgatggaccgcggtctgatcctggag
atccagcagcaggacatctatgccatccgcctctgtcagtgcaaggtattctggtctggc
ccgggaatgccagaactgggtccacccaactccatggagcgagagaggaggatacgggtg
ttcagcctgaacgacttcctgcaagggctgatctcgttccagaagggcgaagctgccaat
ccgccgccatttgacgtcttcttctgcttcggagaggactggccggacaggaagcctaga
gagaagaagctcatcatggtccaagtggttccggtggtggcccggatcctgacggagatg
ttctccggagagctggcctggtccaccgacagcatccggctgcagatctccaacccggac
gtgaaggatcagacggtggagcagttcaaggagctgcagcgcctgctccagaaccaactg
ggtccaaccgggccctgggcccccgtcggctctctagaggcctctaccgggttctccatg
gggaccagctga
DBGET
integrated database retrieval system
