Poeciliopsis prolifica (blackstripe livebearer): 129352430
Help
Entry
129352430 CDS
T09758
Symbol
otofa
Name
(RefSeq) otoferlin isoform X1
KO
K19949
otoferlin
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprl04131
]
129352430 (otofa)
Membrane trafficking [BR:
pprl04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
129352430 (otofa)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2
FerB
Ferlin_C
dsrm_Ferlin
FerI
Motif
Other DBs
NCBI-GeneID:
129352430
NCBI-ProteinID:
XP_054877380
LinkDB
All DBs
Position
Unknown
AA seq
2048 aa
AA seq
DB search
MMSLVVHLKTVAHLRGKGDRIAKVTFRGLPLYSRVAENCGEVAHFNETFRWPIASRLDQN
EMLEIQVYNYSKVFTNRLVGTFCMVLQKVAEEGHLELTDTLIDDNNMSIKTSVTLDIRYQ
PMDGTGGMWSDGEFLDVPDDRDGMFAFETDSLLSGQSHGSGTSPGWSLQGSIPTFRKAGR
GVFSAMKLGKTKTSKDDHKRGDEPAVLEMEDLDKKAMRLAGMLEPDTISLASVTAVTTNV
SNKRSKPDIKMEPSSGRPVDYQISITVIEARQLIGLNMDPVVCVEVGDDKKYTSMKESTN
CPYYNEYFVFDFHVPPDVMFDKIIKISVIHSKNLLRSGTLVGTFKMDVGTVYSQPEHQFY
HRWAILSDPDDITAGCKGYVKCDIAVVGKGDNIKTPHKANETDEDDIEGNLLLPEGIPAE
RQWARFYVKIHRAEGLPKMNTSIMANVKKAFIGENRDLVDPYVQVQFSGQKGKTSVQKSS
YEPIWNEQVIFTELFPPLCKRIKVQIRDSDKVNDVAIGTHFIDLRKISNDGDKGFLPTLG
PAWVNMYGSTRQYTLMDEHQDLNDGLGEGVSFRARLLISVAVEILDTTLPEIICSTDVQV
EPVSNISESATGKMEEFFLFGSFLEATMIDRKIGDKPISFEITIGNYGNHIDGVSKSSSV
KKKKKEEENQEEENELIQNSSEDEDDEDADLTSVSSTPPMKPFITDRNYFHLPYFEKKPC
VYIKSWWQDQRRRLYNSNMMDKIADKLEEGLNDVQEIMKTEKAFPERRLRGVLEELAIGC
SRYVTLANKDVNLAGRTKLDRERLKSCMREMDCMGQQAKQIRTQVKKNTVKEKLKLAQNF
LQRLRFLADEPQHSIPDVFIWMMSNNKRIAYARIPSKDILYSVVDEETGKDCGKVKAVFL
KLPGKKGFGPAGWTVQAKLELYLWLGLNKSRKDFLNGLPNGFEEIRATKTGPGLPPVTLI
YDMKQVFQLRAHMYQARSLFAADSSGLSDPFARVFFSSQSQVTEVLNETLCPTWDQLLVF
DDVELFGEATELRDDPPIIVVEFYDQDTVGKAEFIGRTFAKPTIKMRDEPYGPPRFPPQL
EYYQIYRGNSIAGELLAAFELLQIPFDAEEIRRALIAVHDFAVPQIKVGQGGRADLPPLE
GPTDSERGPILPVPLGIRPILSRYRIEVLFWGLRDLKRINLAQVDRPRVDIECAGRGVQS
ALIQNYKKNPNFSTLVKWFEVDLPENELLHPPLNIRVVDCRAFGRYILVGSHAVSTLRYF
IYSPPDKSCNNWATAAKLMNGYMVLTNGCSRARASPSLSSRTFSRPAGDVSVNLEAEPAV
RKMDTVVKLDAMSDAVVKVDMNEDESDKDKKKKKKKKKGGVEEEEETDERVLDWWSKYFA
SIETLKENLRSQEAAQAEAEEREDLEIAAEAADIRPDDLHLKGSKMKERFKEKKSSKQKR
SHAADGSEKRPPKARVDELVVYNKELESEYGNFEDWLHTFNLYRGKAGDDHEHALDDDRI
VGRFKGSLCMYKVPLSQEITREAGYDPNMGMFQSIPHNDPIHVLVRVYVVRATDLHPADI
NGKADPYIAIKLGKSEIKDKENYISKQLNPVFGKSFDIEATFPMESMLTVSVYDWDLVGT
DDLIGETKIDLENRFYSKFRATCGIASNYSMHGYNIWRDPMKPSQILAKLCKEGKIDGPH
YGPGGKVKVANRIFTGPTEIEDENGLKKQTEEHLALSVLNHWEEIPRVGCKLVPEHVETR
PLLNPDKPGIEQGRLEMWVDMFPMDMPAPGPAIDISPRKPKSFELRVIIWNTDDVILEDD
AFLTGEKMSDIYVRGWLKGQQEDKQDTDVHYHSLTGEGNFNWRFVFPFDYLVAEEKIVIS
KKESMFSWDETEYKIPPRLTMQVWDADHFSADDFLGAIELDLNRFPRGAKTAKLCNLDMI
RNEQELPTISIFKQKRVKGWWPFVARDENDEMELTGKVEAELHLVTAEEAEKSPVGLGRN
EPDPLEKPNRPDTSLMWFLGPLKSLRYFIWHNYRWLILKALGLILLLLMLGLFLYSIPGY
LVKKILGA
NT seq
6147 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctctagtggttcacctgaagacggtggctcaccttcgggggaaaggtgacagg
attgcgaaagttacattcagaggtctgcccctctacagccgcgtagcggagaattgtggg
gaggtggctcactttaatgagacttttcgatggcccattgccagcagacttgatcaaaat
gagatgttggagatccaagtgtacaattacagcaaagtcttcacaaatagacttgttggg
acgttctgcatggtgcttcagaaagtggctgaggagggacatctagagctgacagatacc
ctcattgatgacaacaacatgtcaataaagaccagtgtcaccctagacatccgataccag
ccgatggatgggacaggggggatgtggagcgacggagagttcctggatgttcctgatgac
cgtgatgggatgtttgcttttgaaacagacagcttgctttccggacagagccacgggtca
gggacatctcctggatggtcattacaggggtccataccaaccttcagaaaagcagggaga
ggagttttctcagccatgaaacttggcaagacaaaaacctcaaaggacgaccataaaaga
ggagatgaaccagccgtcctggaaatggaagatctggataagaaagccatgcgtcttgct
ggaatgctggagccggacaccatatctttggcctcagtgactgctgtcacaactaatgtt
tccaataaaaggtcaaagccagatatcaagatggaaccaagctctggaaggcccgtggat
tatcagatcagtattacagtgattgaggctcggcagctaataggcctgaacatggatcct
gtggtatgtgtggaggttggagatgacaagaaatatacatccatgaaggagtctaccaat
tgtccgtactataatgagtatttcgtcttcgatttccacgtcccaccagatgtcatgttt
gacaagatcatcaagatctcggttattcattctaaaaaccttttaagaagcgggacgttg
gtgggaacctttaagatggatgttgggacggtttactctcagcctgaacaccagttctac
cacagatgggccatcctatctgatcccgatgacatcacagcagggtgcaaaggatacgta
aagtgtgacattgcagttgttgggaaaggtgataacatcaagacgccgcataaagccaat
gagacagatgaggacgacatagaaggaaatctgcttctcccagaaggcataccagcggag
aggcaatgggcgagattttatgtgaagatccacagagctgagggacttcctaaaatgaac
accagcatcatggcgaatgtgaaaaaggcctttattggagagaacagagatcttgttgac
ccctatgttcaagtgcagttttctgggcaaaagggaaagacttcggtccagaaaagcagc
tatgagccaatctggaacgagcaagtcatcttcacagagctgttccctcctctttgcaag
aggatcaaggtgcagattagagactcggataaggtcaacgacgttgccataggaacccac
tttatcgatctacggaagatctcaaacgatggtgataaaggctttttgcccaccctgggt
ccagcctgggttaacatgtacggctccactcgtcagtacactctgatggatgagcaccag
gacctaaacgatggtctcggcgaaggcgtgtccttcagagcacgcctccttatttctgta
gccgtggagatcctggacactacgttgcctgaaatcatctgctcaaccgatgttcaggtg
gagcctgtctccaacatctcagagagtgccacaggaaaaatggaggagttcttcttgttt
ggttcgtttctggaggctactatgatcgacaggaagattggtgacaaaccgataagtttt
gaaatcacaataggaaattatggcaaccacattgatggtgtgagcaaatcctcctctgtg
aagaagaaaaagaaggaagaagagaatcaggaggaggaaaatgagctgatccaaaactcc
agtgaggatgaggatgatgaagatgcggacctcacctcagtctcctcgactcctcccatg
aagcctttcatcacagacagaaactacttccatctgccctactttgaaaagaagccatgt
gtctacatcaagagctggtggcaggatcagaggagacggctttataattcaaacatgatg
gataagattgcagacaagttggaagagggcttaaatgatgttcaagagatcatgaagaca
gagaaggcctttccggagcgcagactcaggggagttttggaggagctagcaattggctgc
agtcggtatgtgacacttgccaacaaagatgtgaacctcgcaggcagaactaagcttgat
cgagagcggctcaagtcatgcatgagagagatggactgcatgggtcagcaggccaagcag
attcgcacacaggtgaagaaaaacacggtcaaagaaaaactcaagctggcgcagaacttc
ctgcagaggctccgtttccttgccgatgagcctcagcacagcatcccagatgttttcatc
tggatgatgagtaacaacaagcgcatcgcctatgcccgaattccttccaaagacattctg
tactctgtggtggatgaagagactggcaaagactgtggaaaagtcaaagcagtcttcctc
aagctgcctggtaaaaaggggtttggccctgctggttggacagtccaggctaagctggag
ttatatctatggcttggcctcaacaagagccggaaggacttcctaaatggtctcccgaat
ggttttgaagagatcagagccaccaaaacaggccctgggcttcctccagtcaccctcatc
tacgatatgaagcaggtgtttcagctccgagctcacatgtaccaggcccggagtctgttt
gctgctgacagcagtgggctttcagaccccttcgctcgggttttcttctcctcacaaagc
caggtcactgaggttctaaatgagacgctctgccccacttgggaccagctgctggtgttt
gatgatgtcgagctgttcggagaggctactgagctcagagacgatcctccaatcattgtt
gttgagttctatgaccaggacactgtgggaaaggcagagtttataggtcggacgtttgca
aagcccaccattaagatgcgtgacgagccttacggacccccaaggttccccccacagctg
gagtattaccagatatacagagggaacagcattgcaggagagctgctggctgcttttgag
ctactgcagataccttttgatgcagaggagatcaggcgagctctaatcgctgtccatgac
tttgctgttcctcaaataaaggttggtcaaggaggcagggctgaccttcctcccctcgaa
gggccgacggactcagagcgtggacccatccttcctgttccactgggcatacgtcccatc
ctgagtcgctaccgcatagaggtattattctgggggttaagggatctgaaaagaatcaat
ttggcccaagttgatcgaccccgggtggacatcgagtgtgcaggtcgaggtgttcaatct
gccctcattcagaactacaagaagaatcccaacttcagcaccctggttaaatggtttgaa
gtggatctgccagaaaatgagcttctccatcctcctcttaacatccgggtagtggactgc
agagctttcggacgttacatcctggtggggtcccacgctgtttccaccctcagatatttt
atttacagtcctccagacaaaagctgcaacaattgggccactgcagctaagctaatgaat
ggctacatggttctaaccaatggctgctcccgagctcgcgcgtcacccagcctttcttcc
cgcaccttctctcgtcccgcaggtgacgtctccgtcaacctggaagccgaacccgcagtc
cgaaagatggacacagtcgtcaagttggacgctatgtctgatgctgttgtaaaagttgat
atgaatgaagacgagagtgacaaggataaaaagaagaagaaaaagaagaagaaaggagga
gtagaggaagaggaagagacggatgagcgagtgctggactggtggtccaagtattttgcc
tccattgagacgctgaaggagaacctcagatcccaggaagcagctcaagcagaggcagag
gagagagaagacctcgagatagcagctgaggctgcagatatcagacctgatgacctccat
ctaaaaggctccaaaatgaaagaaaggttcaaagagaagaagagctccaagcagaagagg
agtcatgctgcggacggctcagagaagcgaccccctaaagcaagagtggatgagctagtg
gtgtacaacaaagagctggagagtgagtatggcaactttgaggattggcttcacaccttc
aacttgtacagaggaaaagctggagatgatcacgaacatgccctggatgatgacaggatt
gtaggcagattcaagggctctttatgtatgtacaaagtaccactttctcaggagatcaca
agagaagctgggtatgatcccaatatggggatgttccagagcattccgcacaacgacccc
atccacgttcttgttcgtgtctatgtggtcagggccacagaccttcatccagctgatatt
aatgggaaggctgatccatacatcgccattaagctgggcaaatcagaaatcaaagacaaa
gagaactacatctccaagcagctcaaccctgtatttggcaaatcctttgacatcgaagcc
accttccccatggagtccatgttgacagtgtctgtctatgactgggatttggtcggcaca
gacgacctgattggagaaacaaagattgacctggagaatcgcttttacagcaaattcagg
gccacatgcggcattgcgtccaactattctatgcatggttacaacatttggcgtgatcct
atgaaacccagccagatcctagctaagctctgtaaggaagggaagatcgatggacctcat
tatgggccgggaggcaaagtcaaagtcgcaaatcgaatctttactggaccaacagaaata
gaggatgaaaatggtctgaagaagcaaacagaggagcatttagccctgagcgtgttgaac
cactgggaggaaatcccaagagtcggctgcaagctcgttcctgaacacgtggagaccaga
cctcttctgaacccggacaaacctggaatcgaacaggggcgacttgagatgtgggtggac
atgtttccaatggatatgcccgctcctggacctgcaattgatatatccccacggaaacca
aagagttttgagctccgtgttattatttggaacactgatgacgtaattctagaggacgat
gctttcttgacaggagagaagatgtctgacatctatgtcaggggatggctgaaagggcag
caggaagacaaacaggacacagatgtgcattaccactccctcactggggagggcaacttc
aactggcgcttcgtcttcccattcgattacctcgtggctgaggagaagatcgtcatctct
aagaaagagtccatgttctcctgggacgagactgaatacaagatccctcctcgtctcaca
atgcaggtctgggatgccgaccacttttctgctgatgactttctcggggctattgaactg
gacctgaacaggttccctcgcggcgcaaagacagccaagctgtgcaaccttgacatgatc
cgaaatgagcaagagcttcccaccatttctatcttcaagcagaaaagggtcaaaggctgg
tggccttttgtggcacgtgacgagaatgacgagatggagctcactggtaaagttgaggct
gagcttcaccttgtgactgcagaggaagcagagaaaagtcctgtggggctggggagaaat
gagccagacccactggagaaaccaaaccgtccggatacgagtctaatgtggtttctgggc
cctctgaagtcacttcgttacttcatctggcacaactaccgctggctgatcctcaaggct
ctggggctgatactgctgctgctcatgctgggcctcttcctctactccatccctggctac
cttgtcaagaagatcctgggggcctga
DBGET
integrated database retrieval system
