Poeciliopsis prolifica (blackstripe livebearer): 129353343
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Entry
129353343 CDS
T09758
Name
(RefSeq) protocadherin-15-like
KO
K16500
protocadherin-15
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
129353343
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pprl03037
]
129353343
04515 Cell adhesion molecules [BR:
pprl04515
]
129353343
Cilium and associated proteins [BR:
pprl03037
]
Primary cilia and associated proteins
USH complex and associated proteins
129353343
Cell adhesion molecules [BR:
pprl04515
]
Cadherins
Protocadherins
129353343
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
ECD
PCDH15_12th
Cadherin_FAT4_N
Ig_Cad99C_N
Cadherin_CELSR2_9th
Ig_CLSTN
Cadherin_2
CDH23_a-b
TagA
Cadherin_4
TdpA
Motif
Other DBs
NCBI-GeneID:
129353343
NCBI-ProteinID:
XP_054878601
LinkDB
All DBs
Position
Unknown
AA seq
1809 aa
AA seq
DB search
MVVRMVRTRLMGPPSRGRVRWMNVMRTGLLHLLLLSACLGQDTEDWQYEECKLSRSGPPA
TIVAIDEESPNGTMLVENMQINGVAEGPDRTISLSLRDNHDYWVILDPARQSLYLNSTGR
VLDRDPPSFIQSIVVQVQCTNELIGTVILHEVRIVVRDRNDNAPHFQQPRYYVAISELTP
VGTTIFSGFSGNNGATDIDDGPNGQIEYTIQYNPKDPTANRTFDIPLTLFGSVVLRERLN
YEEITRYLVIIQANDRAPSPSDRRTATTTLTVDVLDGDDLGPMFLPCTLVGNTRDCSPIT
YLASVLELTEPNKTNPLNVTPPIQAVDQDRNIQPPSDRPGILYSILIGKPASYTEYFSLN
RTTAELMLLKPIDRELHRRFDLVIKAEQDNGHPLPAFANLQIEVLDENNQAPYFLESGYH
GYISEASPVGTTVAINVTLSTPLTIIALDNDVEEARDPQLQFSLDSYSHVFSISATGIRR
YLTLLQPVDRETQDSYTFTLLASDGVQQSAPVFVTITVLDANDNTPTFSDVSYSVNLFTD
MLPGETVIQMSAVDSDAGENGQISYRILAGDQGKFLINSSTGVITVAPGAELTVGRSYGL
TVEAADNGPVPHRRSSITTVYIEVLPPNNQSPPRFPRQQYNLEISEAMRTGATLLNLQAV
DREKDPITYKIHSGDINGNFALQQNSGYLILDKALDRESLDHYILIVTASDGRPDGTSTA
VVNVVVTDVNDNDPVFNSSLPVNLTVTEEQDNAFVGQIMATDLDLGANGQVHYTLVNHQT
LFSINASGAIRTAVPLDREVKGHYFLVVEASDGAVDPRRSRLTLSVTVLDVDDNSPIFSQ
QSYNVNLPENSPEDTVILQLKARDADLISNLTYRIRAEGLDPEITRLFRIDPVTGELSVL
KVLDFEALAAPEPMYTFTVEAVDVEGTMPPGLASVTVRILDMNDFAPSFRQPVYRGMVAP
NALKGTIVTTVIANDSDPAGTPAGLIRYKVDQEAYPYSASIFDVDEEKGHVVTRVNLNEE
PNLKFRLVVVAYDHGEPVKKNTTLVEITVLQPSVIPVFTREEYRFPPVSEEAAVGTLVGL
IMAAAVNQTIVYSIVEGNEGGVFSLNKTTGEISTAKPLDYETNSSYVLKVEADSMRVVSS
NLRAPSKSNTARVVIDVQDENDHPPVFTRSLYIGGVAEDAKTFTSVLQVKAVDKDTGNYS
SMVYRLIIPPPTGKETKDSKDGFVIEPYTGVVKTAIMYRNMRRSYFKFEVAATDNYGQGH
SSRAEIVVSVVNLLDMQVVVSNVPPTYVEKNKDQLLSILERYVQEQVVGAKVVVETIGPH
RDGEAMELEDYTKSDLMIYAIDPLTNRAISRQELFKFLDGKILDINKEFQPFLPPGGRIL
EIRTPEVVASVKKSVHSVGYTEGALLALAVIIIICCVPAILIVIITYRQFKERQAECAKT
ARIQMALPTGKPGGGTANNLYEELGDNAMRGYGQHETQQLLRPSLLRPEELSMESGIDPG
QDYYTQDYYNYDHGYELPQYGSRRKLISPSGLYDEYGEVVVDDDGSYYYSPQESDGEAGG
RKRRIKLMVDREYETSSTGEESLPETQRSRLSTTHNSHVNVNGGIYVAQNGSIVRTRRSV
NASGPSQSTSSTKNNPKPSSPIFSSRLAKHFKKLDKMATTLEERVPLNTTKTPAGEGRNT
LSTFQSCRRAASATATSSFHNTNKMLNVLNTRQSSVSLGSTSTSNTGPESVMSKPDVLPA
ALVVTEQPESSSEQDGPAEGELESKVDGNGSGEAVSREPLECPSDRTQSDEEELWMGPWN
NLHIPMTKL
NT seq
5430 nt
NT seq
+upstream
nt +downstream
nt
atggtggtgaggatggttagaacacgattaatggggccgccgtcacgaggccgagtcaga
tggatgaatgtaatgagaactggactccttcatctcctgctgctatcagcctgcctcggc
caagacacagaagactggcaatatgaggaatgtaaactctcccgttctggtcctcctgct
accatcgtggccatagatgaagaaagccccaatggaacaatgttggtggagaacatgcag
atcaatggtgtggcagagggtccggatcgtacaatttctttgtctctaagagacaaccac
gactactgggtgattcttgatcctgccaggcagtctctttacctgaacagcactggacga
gttcttgatagagacccaccgtcgtttattcagtccatcgtggttcaggttcagtgcacc
aatgagctgattggaacagtgattttacacgaggtccgaattgttgttcgagatcgcaat
gacaacgctccacatttccagcagcctcgatactacgtcgccatcagtgagctaacccct
gtaggaacaacgatcttctctggtttctctgggaataatggtgcaacagacattgacgac
ggccccaacgggcagatagagtacaccatccagtacaacccaaaagatccgactgccaac
aggacctttgacatccccctgactttatttggctccgtagttctaagggagcggctcaac
tacgaggaaataacacgatacttggtcattatacaggcaaatgaccgggcaccttcaccg
agtgaccgtcgaactgccaccaccacactgacagtggatgtgctggatggagatgacttg
ggtcccatgttcctaccttgtacactcgtgggaaacactcgtgactgtagtcccatcacg
tatttagccagtgttctggagctgacagagcctaataagacaaatcccctcaatgtgacc
ccgcctatccaggccgtggaccaggacagaaacattcaacctccatcggacagacctggg
atcctgtactccatccttattggcaaaccagcatcctatacagaatatttcagcttaaac
agaaccacagcagaactcatgctgcttaaacccattgacagggaactccaccgcagattt
gatctggttatcaaggcggagcaggataatggtcaccccctgccagcgttcgccaacctt
caaatcgaagttctggatgagaacaaccaagcaccgtacttcttggagtctggctaccac
ggatacatcagtgaagcttcaccagtcggcaccactgtcgccatcaacgtcactctatcg
actcccctcactataatagctttggataatgacgtggaggaggcccgggatccacagctg
cagttttctctggacagttattctcatgttttttctatatcagctactggaataagaaga
tatctcacactgttgcagcctgtagacagagaaacacaagactcctatacattcacgctg
ttagcatcagatggtgttcagcaaagtgctcctgtttttgtgaccataacagtgctggat
gccaatgacaatactccaactttttccgatgtctcctatagcgtaaacctgttcactgat
atgttgcctggagaaactgtcatacagatgtcagcagttgattctgatgcaggtgaaaat
ggccaaatcagttatcgcatcttggctggtgaccagggaaagtttctaataaacagcagc
actggggtaattacagtggcaccaggtgctgagctgactgttggccgcagctacggtctg
actgtggaagctgcagacaatgggcctgtgcctcacagacggtcttccattacaacagta
tatattgaagttttgcccccaaacaaccagagccctcctcgcttccctcgccaacaatac
aaccttgagatcagtgaagcaatgaggactggtgctacacttcttaatctgcaggcagtg
gatcgagagaaggatccaataacctacaaaatccacagtggagatattaatggaaatttt
gcactgcagcagaattcagggtatttaattctggacaaggctttggacagggagtctctg
gatcattatatcctgattgtcaccgcctcagacggacgaccagatggaacctccactgct
gtggtgaatgtggtggtgactgatgtgaatgacaacgatccggtgttcaactcttcactg
cctgtgaatctcaccgtcaccgaggagcaggataacgccttcgttggacagatcatggca
acagatctggatctgggagcaaacggtcaggtccattacacgcttgtcaatcaccagacg
ctgttttccatcaatgcctctggagccatcaggactgcagtgccactggacagagaggtg
aaaggtcactatttcctggttgttgaagcctcggatggtgcagtggaccctcggcgatcg
aggctcaccctctctgtgactgttttggatgtggacgacaacagcccgatattctcccaa
cagtcctacaacgtcaatctacctgagaacagcccagaggacactgtcattttacagtta
aaggcaagagatgctgacctcatctccaacctcacatatcgaatcagagctgaaggcctg
gatcccgagataacacggcttttccgcattgaccccgtgacgggggagctgtcagttctt
aaggttctggactttgaagctctggctgcccctgagcccatgtacactttcactgtagag
gctgtcgacgtggagggaacaatgcctcctgggcttgcctcagttactgtcagaatactg
gatatgaatgactttgctccctcattcagacaacctgtctacagaggcatggttgctcct
aatgctctcaagggaaccattgtgaccacggtgatagccaacgattctgaccctgcggga
acccccgcaggtctaatccgttacaaggtggaccaggaggcctatccatactctgccagt
atattcgatgtagatgaagagaaaggtcatgtggttaccagagtaaatctcaatgaggaa
cccaacttaaagttcagactggtggtggtggcctatgatcatggcgagcctgtgaaaaag
aacacgactctggtggaaatcacagtgcttcagccctctgtcatccccgtgttcactcgg
gaagaatacagatttccaccagtgagtgaggaggctgctgttggaaccctagtgggactc
atcatggcagcagctgtcaatcaaactattgtgtattccatcgttgaaggcaatgaggga
ggtgtgttttcattaaacaaaacaactggtgagatttccacagccaagccccttgactat
gaaaccaattccagctatgttctgaaggtggaagcagactccatgagggtggtctcatca
aatctccgagctccatcaaagtctaacacagcccgggtggtgattgatgtccaggatgag
aacgaccacccaccagttttcaccagatctctttacattggaggagttgcagaggatgcc
aaaactttcacctcggtcttgcaagtgaaggctgtggacaaagacactgggaactacagc
tccatggtctacaggctcatcatcccccctcccacaggaaaagaaacgaaagacagcaaa
gatggatttgtcattgaaccgtacaccggtgtggtgaagacggcaatcatgtatcgcaac
atgaggaggtcatatttcaaatttgaggtggctgcaacagacaactacggtcaaggacac
agcagcagagcagagatagtggtgtctgttgtgaacctgctggacatgcaagtggtcgta
tcaaatgtccctccaacgtatgttgaaaaaaataaagatcagttgctcagcattttggaa
cgctacgttcaggagcaggtggtcggtgcaaaggttgtcgtggaaacaattgggccccat
cgggatggcgaagcgatggagcttgaagattacactaagtcagatctcatgatttatgcc
atcgatccactgacaaacagagccatatctagacaagagctcttcaagtttctcgatggg
aagatattggatatcaataaagagttccagccttttctccctcctggtggccggattctg
gaaatcagaacccctgaagtggtggccagtgtaaagaaatctgtgcacagtgttggttac
acagagggggcactcttggctctggccgttatcatcatcatctgctgtgttcccgctatt
ttaattgtcattatcacatacagacaattcaaagagagacaagcagagtgtgccaaaaca
gcccgcatccagatggcactgccaacaggcaaacccgggggaggcactgccaacaacctg
tacgaggagctcggtgacaacgccatgcgtggatatggccaacatgagacacagcagcta
ctacgaccctctttgctcaggccagaggagttatccatggagtctggcatcgatcccggc
caggactactacacacaagattattacaactatgaccatgggtatgagcttcctcagtac
ggcagtcgcaggaagctgatctcgccctccggtctttacgatgagtacggagaggttgtg
gttgatgacgatggcagctactactacagcccacaggagtcggacggagaggctggtggt
agaaagcggcggatcaagttgatggttgacagagagtacgagaccagctccaccggtgag
gagagtctgccagagacccaacgcagccgtttatccaccacgcacaacagccacgttaac
gtcaacggtggaatctatgtggctcagaacggctccatcgtacgcacacggcgatcagtc
aatgcttcaggtccttcccagagcaccagctccacaaagaacaatccaaaaccaagctct
cccatcttcagctcgcggctggccaagcactttaaaaaactggacaaaatggctaccacg
ttggaggagagagtgcccctgaacaccaccaagacgccagcaggagaggggcgcaacaca
ctgagcacttttcagagctgcagacgggccgcctcagcaacggccacctcctctttccac
aacactaacaaaatgctgaatgtgttaaacactcgacaatccagcgtgtccttggggtca
accagcaccagcaacacaggccctgaaagcgtaatgtctaaacccgacgtgctcccggca
gcgctggttgtcacagagcagcccgagagctcgtcagagcaagacgggccggcagagggc
gagctcgagtcaaaggtggacggaaacggcagcggtgaggctgtttccagggaacctctg
gagtgcccgagtgacagaacacaatcagatgaggaagagttgtggatgggcccctggaac
aaccttcacatacccatgaccaaactctga
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