Poeciliopsis prolifica (blackstripe livebearer): 129354868
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Entry
129354868 CDS
T09758
Name
(RefSeq) LOW QUALITY PROTEIN: zinc finger protein GLI2-like
KO
K16798
zinc finger protein GLI2
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
129354868
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprl03000
]
129354868
Transcription factors [BR:
pprl03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
129354868
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
FOXP-CC
Zap1_zf1
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
129354868
NCBI-ProteinID:
XP_054880375
LinkDB
All DBs
Position
Unknown
AA seq
1342 aa
AA seq
DB search
METSSPPAAQKDKMDGGGFSDLPKKPSPSESRAPQHLFPTFHTPIPIDVRHHEGRYHYEP
HALHAMHSPAGLTGSPVISDVSLIRLAPGGALAATGDPSFGPPHPYVSPHVEQYLRQVHG
SPTLSMISAARGLSPADLAHEHVKERGGLFGLPPPPPPPAGPSAAEYYQLMASHRGPYSE
LLLPGPGAPLAPLAPLAPLADYLSPVDVSRFSSPRLTPRLSRKRALSISPLSDASIDLQT
MIRTSPNSLVAYINNSRSSSAASSSYGHLSVGGRSPSFPFPHPINSMAYQQLLSQQLLSQ
QLLSQQRGLSAFGHNPPLVHPPPTFSSRQPGLGLSSLPTSTLNSHVSSKNHGGDAAVSSS
VDPINKRSKVKAELDGLKPGSPLSPNPYSGARDLKEDAERDECKQEAEAVYETDCHWDGC
SQEYDTQEQLVHHINNDHIHGEKKEFVCRWDDCSREQKPFKAQYMLVVHMRRHTGEKPHK
CTFEGCAKAYSRLENLKTHLRSHTGEKPYVCEHEGCNKAFSNASDRAKHQNRTHSNEKPY
VCKIPGCTKRYTDPSSLRKHVKTVHGPEAHVTKRQRSDLPPRPTRENGENERASRIHREP
SQNSXPRVPEEFLHMKSIKTENPVMHQSSPGGQSSCSSEPSPLGTNNDSGVETAGHSGGS
LGDLSALDDLPFLDDLPFLDSVDFSGGVAAVGLHLRKQLSSSQCLENLKKEKLKAVRDSC
RWANNPTPPAHPGTTLPPIPTSGSLLENSSLCGDPASFPGSGKTTLLGNLPERRDSASST
FSSVYTLSRRSSGIXPGFSTRRSSQTSQFAANRLTNISSADSYDPISADISRRSSQASQF
XGNNSGPGLASPLTLTPAQHYQLKAKYAAATGGAPPTPLPHPDQSCLKDFNEYSSKNRLR
SLQFSQERSLMPHEVPSNIPRRASDPVRPLRPLSQPPLHRFNSMVSLNRRVSLQPHPPPE
KAHSHLSQQPHVGPHGFPHSLQPASISEFITMQTRRCNGNPSGPGDFHGAGGSQQPLLHQ
SRLDGANKSPLMSPSSPHGGAARGQWTMDTSQQYSRLDPRGNLTVIQQNQNAGSFSGTSH
QQVVQHFNNRGKQPGQHRFQQPSNLNEASSPQYRLSQSSYDRNGNAPPCGNILPADMDFG
QLQAAHIKTESCDSSTMTLDQQNCNMTGFRTRNQNPPQLRPPTEPNSPKASKPKVLQPPD
ESQLSFSRVSELPYISEDNALFYTGQIRVLEPNGNLDCHVSLLLSSPSAAPTDNQGSRTA
AEHPQIDFDSMLDDGDHSSLMSGTLSPGLVQSFSQSSSRLTTPRSSVALPSVPTGTGNMA
VGDMSSLLSALAEENKFLHLIS
NT seq
4029 nt
NT seq
+upstream
nt +downstream
nt
atggagacctcgtcgccgccagccgctcagaaggacaaaatggacggcggcggcttcagc
gacctccccaagaagccgtcgccctcggagagcagagcgccgcagcacctcttccccacc
ttccacacgccgatccccatcgacgtccgccaccacgagggccgctaccactacgagccg
cacgcgctgcacgccatgcacagccctgcaggtctgaccggcagccccgtcatctccgac
gtctccctgatccgcctggcgcccggcggcgccctggcggcgaccggcgacccgtcgttc
ggcccgcctcacccgtacgtgtcgccccacgtggagcagtacctgcggcaggtgcacggc
agccccaccctgtccatgatctcagcggccagaggcctcagcccagcagacctggctcat
gaacatgtgaaggagcgcggcggcctgtttggccttcctcctcctcctcctcctccagca
gggcccagcgcggcagagtactaccagctgatggccagccaccgcggcccctacagcgag
ctgctgctgccggggcccggggccccgctggccccgctggcgccgctggcgccgctggcc
gactacctctctcctgttgacgtgtcccggttctccagccccaggctgacgcccagactc
agcaggaagagggcgctgtccatctcgccactgtccgacgccagcatcgacctccagacc
atgatcaggacttcgcccaactccttggtggcgtacatcaacaactcgcggtccagttcg
gccgccagcagctcctacggccacctgtcggtcgggggccgcagcccgtcgtttcccttc
cctcaccccatcaactccatggcctaccagcagctcctgtcccagcagctcctgtcccag
cagctcctgtcccagcagcgcggcctcagcgccttcggtcacaacccgcccctcgtccac
cctccacccaccttctccagtcgccagccgggcctcggcctctcctccctgcccacctcc
accctcaacagccacgtgtcatccaagaaccacggaggagacgccgccgtcagcagctcg
gtggatcccatcaacaaacggtccaaagtgaaggcggagttggacggcctgaagccggga
tctcctctgtcaccgaacccgtacagcggcgctcgggacctgaaggaggacgcggagcgg
gacgagtgcaagcaggaggccgaggccgtttacgagaccgactgccactgggacggctgc
agccaggagtacgacacgcaggagcagctggtgcatcacatcaataacgaccacatccac
ggcgagaagaaggagttcgtgtgccgctgggacgactgttcgcgggagcagaagcccttc
aaagcgcagtacatgctggtggttcacatgaggagacacacgggggagaaaccacacaaa
tgcacgttcgagggctgcgccaaggcctactcccgcctggagaacctgaagacccatctg
cgctctcacaccggggagaaaccctacgtctgcgagcacgaaggctgcaacaaggccttc
tccaacgcctcggaccgggccaagcaccagaaccggacgcactccaacgagaaaccgtac
gtgtgtaaaatcccgggctgcaccaagcgctacacggaccccagctctctcaggaagcac
gtgaagacagtccacggcccggaggcccacgtcaccaagcggcagcgcagcgacctgccg
cccagaccaaccagggagaacggcgagaacgagagagccagcaggatacacagggagccg
tcacagaacagcntccccagagtcccggaggagttcctgcacatgaaatccatcaagaca
gaaaaccctgtgatgcatcagtccagtcctggcggtcagtcatcatgtagcagcgagccg
tcaccacttggcaccaacaatgacagtggagtagaaacagccgggcacagcggggggagc
ctgggggacctgagcgcgctggacgacctgccgttcctggacgacctgccgttcctggac
tctgtggatttctctggcggggtcgcagcggtcggcctccatctcagaaagcagctgagc
agcagccagtgcctggagaacctcaagaaggagaagctgaaggcggtacgggactcgtgt
cggtgggccaacaacccaacaccccctgctcacccagggaccacgctgccgcctataccg
acaagcgggtccctcctggaaaattcaagtctgtgtggagatccagcctccttccccggc
tctggcaaaacgactctgctgggaaaccttcctgagcgccgagacagcgcttccagcacc
ttcagctcggtctacacgctcagccgccgctcctcaggcatcntccctggtttctccact
cggcgctcgagccaaacttcacagtttgctgccaaccgcctgacgaacatcagctcagcg
gactcctacgaccccatctctgctgatatttctcggcgctccagtcaggccagtcagttt
ngggggaataatagcgggcctgggcttgccagccctctcaccttgaccccagcccagcac
taccaactgaaggcaaagtatgctgctgcaactggtggtgcacctccaacacctcttcca
cacccagaccaatcatgtctgaaggatttcaacgagtactcatccaaaaacaggctccga
tccttacagttcagccaggaacggagcttgatgccccatgaagttccttccaacattccc
cgtcgagccagtgaccctgtgagacctttacgtcctctcagccagcctcctctgcatcgg
ttcaacagcatggtctcactcaaccgaagagtctccttgcagcctcatccccctcctgaa
aaggctcacagtcacttatcccagcaaccgcatgttggtccccatggtttccctcacagc
ctacaaccagcaagcatttcggagttcatcaccatgcagacaagaaggtgcaatgggaat
ccctcaggtccaggagatttccacggagctggcggcagccagcagccgctgctccaccag
agccggctggatggggcgaacaagagtccactgatgagtccatcctcaccacacggcgga
gctgcaagaggacagtggaccatggacacctcccagcagtattccaggctggatccacgt
gggaatctgactgtcatccaacagaaccagaacgctgggtctttcagtgggacctcccac
cagcaggtagtccaacacttcaacaacagaggcaagcagcctggacagcaccgtttccag
caaccctcaaacctcaatgaagcttctagccctcagtacaggctcagtcaaagttcctat
gacaggaacggcaacgctccaccctgtgggaacatcctgccagctgacatggactttggt
caacttcaggcagcacacataaaaactgagagttgtgattcatccaccatgactttagac
cagcagaactgtaacatgactggtttccggaccaggaatcagaaccctccccagctgaga
ccaccaacagaacccaactctccaaaagcctcaaaaccgaaggtgttgcagccaccagac
gaatcccagctctccttcagcagagtttctgaactcccttacatctctgaggacaacgct
ctgttctacacgggccagatccgagtcctggagcccaacgggaacctggactgtcacgtt
tccctcctgctgagctctccttcagctgctccaaccgacaaccaggggagcaggactgca
gctgagcaccctcagatagactttgatagcatgctggacgacggggatcactccagcctc
atgtcaggaaccctgagtccaggacttgtccagagtttctcccagagttcgtctcgcctc
accacgccgcgcagctcggtggcgctgccctcggtcccgacgggaaccgggaacatggcc
gtgggggacatgagctcgctgttgagcgccctagctgaggagaacaagttccttcacctg
attagctaa
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