KEGG   Poeciliopsis prolifica (blackstripe livebearer): 129356279
Entry
129356279         CDS       T09758                                 
Name
(RefSeq) LOW QUALITY PROTEIN: small nuclear ribonucleoprotein-associated protein B'-like
  KO
K11086  small nuclear ribonucleoprotein B and B'
Organism
pprl  Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pprl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    129356279
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pprl03019]
    129356279
   03041 Spliceosome [BR:pprl03041]
    129356279
   03032 DNA replication proteins [BR:pprl03032]
    129356279
Messenger RNA biogenesis [BR:pprl03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     129356279
Spliceosome [BR:pprl03041]
 Complex A
  U1 snRNP components
   Sm proteins
    129356279
  U2 snRNP components
    129356279
 Complex B
  U1 snRNP components
    129356279
  U4/U6.U5 tri-snRNP components
    129356279
 Complex C
  U2 snRNP components
    129356279
DNA replication proteins [BR:pprl03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     129356279
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 129356279
NCBI-ProteinID: XP_054881848
LinkDB
Position
Unknown
AA seq 245 aa
MTVGKSSKMLQHIDFRMRCILQDGRIFIGTFKAFDKHMNLILCDCDEFRKIKPKNSKQPE
REEKRVLGLVLLRGENLVSMTVEGPPPKDTGIARVPLAGVAGGPGVGRAAGRGVPAGAPM
PQAPAGLAGPVRGVGGLRSRFCVFQVMTPQGRGTVAAAAAGASIAGAPTQYPPGRGVPPP
MARAAPPPGMMGPPPGMRPPXGPPMGMPPGPXRGAPMGMPPPGMRPPPPGMRGPPPPGMR
PPPRP
NT seq 738 nt   +upstreamnt  +downstreamnt
atgacggtggggaagagcagcaagatgctgcagcacatcgacttcaggatgaggtgcatc
ctgcaggacggacgcatcttcatcggaaccttcaaggccttcgacaaacacatgaacctc
atcctgtgcgactgcgacgagttccgcaagatcaagccaaagaactcgaagcagccggag
cgcgaggagaagcgggttctgggtctggttctgctacggggggagaacctggtttccatg
acggtggaaggcccgccccccaaagacaccgggatcgcccgggtccccctggcgggcgtg
gcgggcgggccgggcgtgggccgcgccgcgggtcggggcgtcccggccggcgcgccgatg
cctcaggcgccggccggactggcggggccggtccggggagtgggcggccttcgcagcagg
ttctgcgtgttccaggtgatgactccgcagggcagaggcactgttgccgcagcagcagca
ggcgccagcatcgccggcgccccgacgcagtacccccctgggcggggagtcccgcccccc
atggcccgagccgcgccccctccaggtatgatgggcccaccccccggcatgcgtcccccg
natgggcccccgatgggaatgccgcccggtccgngccgcggcgccccgatgggaatgccg
cctcccggcatgaggccgccgcctcccgggatgagaggaccgccccctccaggaatgagg
ccgccgcccaggccatga

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