Poeciliopsis prolifica (blackstripe livebearer): 129356326
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Entry
129356326 CDS
T09758
Symbol
ttc3
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase TTC3
KO
K15712
E3 ubiquitin-protein ligase TTC3 [EC:
2.3.2.27
]
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pprl04121
]
129356326 (ttc3)
Enzymes [BR:
pprl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129356326 (ttc3)
Ubiquitin system [BR:
pprl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129356326 (ttc3)
BRITE hierarchy
Motif
Pfam:
TTC3_DZIP3_dom
zf-RING_2
zf-rbx1
zf-C3HC4
TPR_17
zf-C3HC4_2
TPR_2
zf-C3HC4_3
TPR_16
zf-RING_5
zf-RING_11
zf-RING_UBOX
zf-ANAPC11
zf-HC5HC2H
TPR_1
TPR_19
TPR_11
Motif
Other DBs
NCBI-GeneID:
129356326
NCBI-ProteinID:
XP_054881889
LinkDB
All DBs
Position
Unknown
AA seq
1713 aa
AA seq
DB search
MTAETSIKGNTMGINDKYRQAFLVDLSKMSDSDSDSDWGFXRNKKFLKSHGEIKINFSER
VLSQWGSIPLHXKKEGAQRMRVCVFWFPTLLQPDISKTFTWAAEVGLINEEKSEVLDVEN
LRKIQVVETILLHLEVATLDKDSSRHVFIFCNMLHQHCSPEILEEAVRWLETLGDRFRRE
QLLCLGGFPNCYTTFGFIFSEYAKFIREMSNNLDATMKALKAPPDESSAMESEAMKMFGN
EKFQAQQYAEALMFYTNAIKCYPDNHILYGNRALCYIKQKEYLKAAGDGKRAVLIDPLWA
KGHYRYCEALFCLGAMDLALEANRTARWLCRENPEGLKDLDQQFLKFRPPPPAELPQRPQ
SFKVGLVKKIPQATKTGGKNNLTRSSAAKVSHRGKTDKKTALSDPEGRLKTSRSERDDLS
GSKIKSKSQSEMQKANQNQKMADSKADLCKELRFLVQEAQSALSDLRSRNAEQAFSQALG
LLEAAPAEKLGLSSLDVLLLLFGRASALIEIGQPEELAEAEKLLEXMKSFEERTFQCLVY
YAIGRVFLRENRFKVAMQQFSDSLQMVKNQITPGKLTWPLTXEIVKETQADSFKEMLEES
IELCRFPPAPDAVCRLXKCLCPLKAEIYFTDPDFKGYIQICCCQSCKVEFHISCWKSLKS
TKFSEKNEKDVLNEACLTPDCLGKICSIRIFGPTGLVKCKFEMTITKPELPKKPRVNQKA
TSVKKLKSKXDQKQKRKQFKQTFKDPKTNNQEILQKDDSGSQNQQKAWLVYRDRVLLQIN
QNLDLLREEQGLQVSALASGLRPWLELDWARGNRLAGRLLHWQQERLQTLGQAVELLLER
KNRVWARVFIQQLSHCVGIDAKLSKWACQLDGAGLTAAQTFIERHSEHLEQLDLAVLLNF
DPLKQMILEKLDTKVDLFWRLGLTVTEFLKQASARDVRLFIWTLEEHRHDYVCCHSILDE
YFDMMDTHCSVLKKSENDHISPTRSRSRGRKRNERXMGVFGLPPTRALTPRDXWDQDLFE
EDSLSFLHPGDPFSVPSHLREQVADFEDQYRSTYTKFLDNHPDSTKESLYEYFAQILEEH
GPLVDEDRLLVGELAXLPDAARRKIAEAGGLESFLLESLHFIKIGRRIGLTRQAVGPRHA
ASLDDLDDIGDPRHDAASPDPRALAPTTXVGFCFPVAGAQPVLPDPYSFYPAGSDAAAAW
SVIDCGCTAKRFAEPQLDALDDISEQLDRDPTPHKSVFSSEASRCRSDAAVQTSAGAVSS
VAVNTERHERWEAQQGDIIXQERSNRKLEQQILQTXNEVDQSEHDDVRLMEKEMKEITTN
IQVTHRELLMFQQKLXEEVKKDQKEKKSNXEELKVLKTEVEHLVXEQASFSRSIREKNNS
YEVKLNDFLELSNQSAAEKMSLEDEIKRHQALLTSAGRRSYMAQLSAAESSXDQSLNVLH
RELADAKTLLSKLDEAVLRTQNQELEPVRNGCKAKVEEVEKNISTAERRYQDVLDQLSGR
RVGDGAAAPIGPVLQIPAAANDPPPQPASPAAAEAAPPAAPPRAAARKEPLLVSVFQKAM
DSLTAMFPDYSRSDLMRFVQDFRLARGGSLNLVPLQEVVSGVAQLILDHQETLKSSAAVG
RSSPAQGNQNPVWQLVGAQRVRNPNALNMEDPCIICHEDMSPEDACVLECRHSYHDQCIR
SWLKEKNTCPTCRTHALLPDDFPALSTRRRQAP
NT seq
5142 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcagagacgtcgataaagggcaacacgatgggaataaatgataaatatcgacag
gctttccttgtcgacttgagcaaaatgtcagattcagactcggacagcgactggggcttc
ncccgcaacaagaagtttctgaaatctcacggggagatcaaaataaacttttcagagaga
gtgttgagccagtggggctccatccccctacacnacaagaaggaaggcgctcagcggatg
agagtttgcgtcttctggtttcccacgctgctgcagcccgacatctccaaaaccttcact
tgggccgcagaagttggcttaatcaacgaagagaaaagtgaagtgctggatgtggagaac
ctccgcaagattcaggtggttgaaacgatcctgctgcacctggaagtggcaactttggac
aaggattcctccagacacgttttcattttttgcaacatgttgcatcagcactgctctcca
gagatcctggaggaagcggtgcgctggctggagacgctgggcgatcggttcagacgggaa
cagctgctctgcctgggaggattccccaactgctacacaacatttggcttcatcttctcg
gagtatgcgaagtttatccgggagatgagcaacaacctggacgctacgatgaaggccctg
aaggcaccgcccgatgagtcgtctgcaatggaaagtgaagcgatgaagatgtttgggaac
gagaagttccaggcccagcagtacgcagaagctctgatgttttacaccaacgccatcaaa
tgctatcctgacaatcacatcctgtatgggaacagagcgctgtgctacatcaagcagaag
gaatatctaaaagcagcaggagatggaaagcgcgccgttctcatcgaccccctctgggcg
aagggccactaccggtactgcgaggcgctgttctgtctcggggccatggacctggcgttg
gaggccaacaggaccgcccggtggctgtgcagagaaaacccagagggactcaaagatctg
gaccagcagttcctgaagttcaggccgccgccgcctgctgagctgccgcagcggcctcag
agctttaaggttgggctggtaaagaaaatccctcaggcgacgaaaacaggcggcaagaac
aatctgaccaggagctcagctgcgaaggtgagtcatcgagggaaaacggacaagaagaca
gcgctgtccgacccggaggggcgactcaaaacatccagaagtgagcgcgacgacctcagt
ggttctaaaatcaagtcaaagagccaaagcgaaatgcagaaagcgaaccagaaccagaag
atggccgacagcaaagcagatttatgtaaggagcttcggtttctggtgcaggaggctcag
agcgcgctgtcggatctccgcagccgcaacgcagagcaggccttcagccaggcgctgggg
ctgctggaagccgcgccggccgagaaactgggactttcctctctggatgttctgctgctg
ctgttcggtcgagcgtcggccttgatagaaatcggacagccggaggaactggcagaagca
gagaaactcctggagnagatgaaatcgtttgaagagcgaacgttccagtgtctggtttat
tatgccatcggcagagtgtttctacgagaaaatcggtttaaagttgccatgcagcagttt
tcagattcgctgcagatggtgaagaatcaaattacaccaggtaaactcacctggccgttg
accnaagagattgttaaagaaacacaagcggacagtttcaaggagatgcttgaggaatcg
atagagttgtgtagatttccccccgccccggacgccgtctgtcgtcttngaaaatgtctt
tgccctctaaaagctgagatctatttcactgacccagattttaagggctacattcagata
tgctgctgtcagagctgcaaggttgaatttcacatcagctgctggaagagcctaaaatct
accaagttcagtgaaaagaatgaaaaggatgtcctgaatgaggcgtgtttgactcccgac
tgtctgggtaaaatctgctctatacgaatctttggtcctacgggtttggtgaaatgtaag
tttgaaatgaccatcacgaaaccagagctgccaaagaaacctcgagttaaccagaaagcc
accagtgtgaagaagttaaagtccaaangagatcagaagcagaagaggaaacagttcaaa
cagacgtttaaggatccgaaaaccaacaaccaggaaatcctgcagaaggacgactctgga
tcgcagaatcaacagaaagcctggttggtgtacagagaccgggttctgctgcagatcaac
cagaacctggacctgctgcgggaggagcagggcctgcaggtgtcggcgctggccagcggc
ctgcggccctggctggagctggactgggcacgggggaaccgcctggccggccgcctgctc
cactggcagcaggagcggctgcagacgctgggccaggccgtggagctgctgctggagcgc
aagaaccgggtctgggcccgggtcttcatccagcagctcagccactgcgtgggaatagat
gccaagctgagcaagtgggcgtgtcagctggacggcgcagggctgaccgcggcgcagacc
ttcatcgagcggcactctgagcacctggagcagctggacctggcggtgctgctgaacttt
gaccccttaaagcaaatgattttagagaaactagacactaaagtggatttgttttggcgc
ctcggcctgacggtgacggagtttctaaagcaggcctcggcgcgtgacgtccggcttttt
atctggactctggaggagcatagacacgactacgtttgttgtcacagtatactggatgaa
tattttgatatgatggatactcattgttctgtgttaaaaaagtctgaaaatgatcatatt
tctcctactcgaagtagaagtcgaggccggaaaagaaacgaaaggtagatgggggttttc
ggtttgcctccgacccgagcgctaacgcccagagacnngtgggaccaggacctttttgaa
gaagactctttatcgttccttcaccccggtgacccgtttagcgttcccagccaccttaga
gagcaggtggctgattttgaggaccaatacagatcgacctatacaaaatttttagacaac
caccctgactccaccaaagaaagtctgtatgagtatttcgcccagatcctggaggagcac
ggcccgctggtggacgaggaccgcctgctggtgggcgaactcgccnnacttccggacgcg
gctcggaggaagatcgccgaggcgggcggcctggagagcttcctgttggagtcgctgcac
ttcattaagatcgggcgacgcatcggcctgacccggcaggccgtcggcccgcggcacgcc
gccagcctggacgacctggacgacatcggcgacccgcggcacgatgcggcgtcgcccgac
ccgcgcgcgctggctccgactaccnntgtcgggttctgcttccccgttgccggagcgcag
ccggtcctgcccgacccgtactccttctacccggcaggaagcgacgctgcggccgcctgg
tcggtcatcgactgcggctgcactgccaaacggttcgccgagcctcagctggacgctctg
gacgatatttctgagcagttggacagagatccgactcctcacaagagcgttttctcctcg
gaggcgagtcgttgtcgtagcgacgcggcggttcagacgagtgcgggcgccgtgagcagc
gtggcggtgaacacagagcggcacgaacgctgggaggcgcagcagggtgacatcatcnag
caggagcggagcaacaggaagttggagcagcaaatactgcaaaccnncaatgaagtcgac
cagagcgagcatgacgacgtccgactgatggagaaggagatgaaagaaatcaccacgaat
atccaggtgacccatagggagctgctgatgtttcagcagaagctgngagaggaagtgaag
aaggaccagaaggagaagaaatccaacnaggaggagctgaaggtgctgaagacggaggtg
gagcacctggtgngggagcaggccagcttttccaggagcatcagagagaagaacaacagc
tatgaggtcaaactcaacgacttcctggagctcagcaaccagtcagcggctgagaagatg
agtttggaggatgagataaagcgccaccaggctctgctgacctctgctggcaggaggtcc
tacatggctcagctgtcagcggctgaaagcagcnaggatcagagtctgaacgtcctgcac
agagagctcgccgatgccaagacgctgctcagcaagctggatgaggcggtgctcagaacc
cagaaccaggagctggaaccggtgaggaacggctgcaaagcaaaggtggaggaagtggag
aagaacatttccactgctgagcgccgctatcaggacgttctggaccagctgagtggccgc
cgggtcggagacggtgcggccgctccaatcggaccggttctgcagattcctgccgcagcc
aacgatccgccgcctcaacccgcctctccagccgccgccgaggccgccccgcccgccgcg
ccgccccgagccgccgccaggaaggagccgctgctcgtctcggttttccagaaggccatg
gacagcctgaccgccatgtttccagactattccaggtccgacttgatgcgtttcgttcag
gacttccgtctggccagagggggaagtctgaacctggtgccgctacaggaagtggtcagc
ggcgtggcgcagctcatcctggaccatcaggaaacactgaagtcatccgccgccgtgggc
cggtccagcccggctcaggggaaccagaacccggtgtggcagctggtcggagcgcagaga
gtccgaaacccgaacgccctgaacatggaggatccctgcatcatctgccatgaggacatg
agtccagaggacgcctgcgtgctggagtgtcggcacagctaccacgaccagtgcatccgg
tcctggctgaaggagaagaacacctgtcccacctgcaggactcacgcgctgctgcctgac
gacttccccgctctgtccaccaggaggcgccaggccccctga
DBGET
integrated database retrieval system
