Poeciliopsis prolifica (blackstripe livebearer): 129358929
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Entry
129358929 CDS
T09758
Symbol
tiam1b
Name
(RefSeq) rho guanine nucleotide exchange factor TIAM1
KO
K05731
T-lymphoma invasion and metastasis-inducing protein 1
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04530
Tight junction
pprl04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
129358929 (tiam1b)
09142 Cell motility
04810 Regulation of actin cytoskeleton
129358929 (tiam1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pprl04990
]
129358929 (tiam1b)
Domain-containing proteins not elsewhere classified [BR:
pprl04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
129358929 (tiam1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_Tiam1
RhoGEF
Tiam_CC_Ex
PH
RBD
PH_9
PDZ
SOS1_NGEF_PH
PH_10
PDZ_6
PDZ_2
InhA-like_MAM
Motif
Other DBs
NCBI-GeneID:
129358929
NCBI-ProteinID:
XP_054884168
LinkDB
All DBs
Position
Unknown
AA seq
1596 aa
AA seq
DB search
MGNTESQNGEHALYSTGRGYLSRKHMSRSLRISNKQSRRSRHASSGKMEHRNSETSTRSS
STPSIPQSLADNGLEPFNETNNFPDFGSPIWVDRVAMSLRPISFHNDLANPSVHMNTMHI
TLPGPTAEETQDEEVYTNEVKYIQQTLECSKETISFKKRSKSADTWRDDSLEFSLSDVSQ
DNLTSTEEIIDMANERDFPDCEGHMQFSPTDSADRANSLDELYSDTSPASRTHGRYAKWQ
DTNRSVGEGEDGKRLSPSEEDGTSYGAYTLPCRRSHCLSEGLSNLQATMCKSMQGRRAQT
IQDVTAGDGSEYEDSGIDGVMVEAVHQPRRYKTMSASFSVCSMHGRNVFVGSDSGSSSGG
GGASEGVQGVYENFRQELQMSSCQTESLEEAGSALSDEQSTMSSAYQSDLLLSVVQGMVR
KAGKLAVKNFLVHKKNKKVESATRRKWKTYWVSLKGCTLFFYETDGRSGIDNNSIPKHAI
WVENSIVQAVPEHPKKDFVFCLSNSLGDAYLFQTCSQTELENWITAIHSACATAVARQHH
REDTVRLLRAEIKKLEQKIDMDEKMKKMGEMQLSAVTDTKKRKTILDQIFLWEQNLEQFH
MDLFRFRCYLASLQGGELPNPKRLLAFASRPTKLTMGRLGIFSVSSFHALVAARTETGVR
RRTQAMSHSCSKRKSRFSSLWGVDTTSKKKTKAHPTVSQVFADGEEPERKPVDCIFVDSV
KENTKTEDGTVKNLARPNTDSDMWVPENLTPSWVCLPNDQPVLTTIQPGESALCVLESIC
KTHELDPTKHYLRLKFFVENQTQFYIPKPEEDIYDLLYKEIELCSKITKVIQFDRDESCM
IGYGFSISVVEEDGVQQLYITDVKAGGLAFAKGLNAGDEILQLNGKDSHSLNFSDMKAAF
SQVSLALTVNTLPSVDRRQLCYLPPRRSDAAEDLYTDIFSQSQEEILDDGVGLLLESSGD
SLDDDSEIFSEFDECGKSTEQVAAFCRSLHDMNPSECVSSSPSPDSPFPPTATPRQLSDA
DKLRKVICELVETERTYVKDLNCLIGRYLTPLQKENFLTQDELDVLFGNLPEMVEFQVEF
LKTLEDGTRLVPDLEKLESVDQFKKILFSLGGSFLYYADRFKIYSAFCASHTKVPKVLVK
AKTDPNFKAFLDERNPKQQHSSTLESYLIKPIQRVLKYPLLLRELYSLTDPDSEEHYHLD
VAIKAMNKVASHINEMQKIHEEFGAVFDQLITEQSSEKKDVADLSMGDLLLHNTVTWINP
PMSLGKWKKEPQMATFVFKTAVVFVCKEESKQKKKIGGSHRVSVSSEEKDPFRFRHMIPT
HALQIRSMSNTDGESSAMCEIVHTKSESEGRPERTFHLCCSSPESRKEFLKTVHSILREK
HRRQLLKTESLPLNQQYVPFGGKRLCALKGARPAINRAASAPTRTLGRRKLVRNRFTIDT
DIVFDGDSEQQDLTSPQETESVPLQQKEEQQSELAGDTDRWVEEQFDLEEYEDQEEMKET
DILSDDDDEFCQTPRALSEEADLESPLMALSLEGAETDGSKSLPSPTVSDTPDEEKISNT
ERKSSVTNNSEDKNQAEKAEVWVRREPSDSSLECPT
NT seq
4791 nt
NT seq
+upstream
nt +downstream
nt
atggggaatactgagagccaaaacggggaacatgccctctacagtactggacgtggctat
ttgtcacggaagcacatgtctcggtctctacgcatttccaacaaacagtcaaggcgttct
cggcatgcttcatcaggaaaaatggagcacagaaactctgagacaagcactcggtcaagt
agcacccccagcatcccacagtccctagctgacaatggtttggaaccattcaatgaaaca
aacaacttccctgactttggaagccccatttgggtggatcgtgtggcaatgagtttgcgc
cctatatcctttcataatgatctggccaatccctcagtgcatatgaatacaatgcacata
accctacctggtcccactgcggaagagacgcaggatgaggaagtgtacacaaatgaggtt
aagtatattcagcagaccttagagtgctccaaagagacaatcagcttcaaaaagagatca
aaatctgcagacacctggcgagatgacagtctagaattttccctgtctgatgtcagtcaa
gataatttaaccagcaccgaggagatcatcgacatggctaatgagagagacttccctgac
tgtgaaggccacatgcagttcagcccaacagactccgccgacagagcaaactcactggat
gaactgtacagtgacaccagcccagcctccagaacccacggccgctatgccaagtggcaa
gacaccaacagatctgtgggagagggagaggacggtaagaggctgtcaccatcagaggag
gatgggacttcatacggcgcgtacactcttccctgccgacgttcccactgcctgtctgaa
ggcctgagcaacctccaagccacaatgtgcaagagtatgcagggccggagagcacagacc
atccaggatgtcacggccggagatggcagtgaatatgaagacagcgggatcgacggggtg
atggttgaggcggtgcaccaacctcgacgctacaagacgatgtcggcgtccttctctgtc
tgctccatgcacgggcggaacgtgtttgttggcagtgacagcggcagcagcagtggcgga
ggtggcgccagcgaaggtgtgcagggtgtgtacgagaacttccgtcaagaactccaaatg
agttcctgccagacagagagcttggaggaagcaggctccgcccttagcgatgagcagagc
accatgagctccgcctaccagtctgatctgttgctaagtgtcgtccaggggatggtccgt
aaagccggaaaacttgctgtaaagaacttccttgtgcacaaaaagaacaagaaagttgaa
tctgccacaagacgcaagtggaagacttactgggtttccctaaaaggctgcacgctcttc
ttttatgaaactgatggccggtcagggatagacaacaacagtattcccaagcatgccata
tgggtggagaacagtatcgtccaggctgtgcctgagcaccccaaaaaggactttgtgttc
tgcctcagcaattccttgggggatgcataccttttccagacttgcagccagacagagcta
gaaaactggatcacagccatccactcagcatgcgccaccgccgtcgctcggcagcatcac
agagaagacaccgttaggctgctgcgtgctgagatcaagaagctggagcagaagatcgac
atggatgaaaagatgaaaaagatgggagagatgcaactgtctgccgtcactgacaccaag
aagaggaagacaatcctggatcaaatcttcttgtgggagcagaacctggagcagttccac
atggatctgtttcgctttcggtgctacctggccagcttgcaaggtggagagttgcccaac
cctaaacgcctcctggcctttgcctcccgccccaccaaactaaccatgggcagactggga
atattctcagtctcttcctttcatgcactggtggcagcccgcacagagactggagtgaga
cgcagaacgcaagccatgtctcattcctgcagcaagcgcaaaagcaggttttcctccctc
tggggagtagacacaacctcaaagaagaaaacaaaagcccaccctacagtcagccaggtg
tttgctgatggtgaagagccagagagaaaaccagtagattgcatatttgttgattctgtg
aaagaaaacacaaaaacagaagacggaactgtgaaaaacctcgctcgaccaaacactgat
agcgacatgtgggttcctgaaaacctcactccctcctgggtttgtctgccaaatgaccag
cctgtgttaaccaccatccagccaggagagtctgcattgtgtgttctggagtctatatgc
aagacccatgagcttgacccaaccaaacactacttgcggcttaagttctttgtggaaaac
caaacgcaattctacattcccaagccagaagaggacatctatgacttgctgtacaaagaa
atcgaactctgctccaaaataactaaagtaatccagtttgacagagatgaatcctgtatg
attggttatggtttttctatctcagtggtggaagaagatggagtgcagcagctctacatc
actgatgtgaaggctgggggcttagcctttgccaaaggtctgaatgccggagatgaaatt
ctccagctgaatgggaaagactcccacagtctcaatttctcagacatgaaggctgcattc
tcccaagtgtctctggctttgacggtcaacactctgccctcagtggaccgccgtcagctt
tgctaccttccaccacggcgctctgatgcggcagaagacctttacactgacatcttctcc
caaagtcaagaggagattctggacgatggggtaggactgctgcttgagagctctggagac
agcctggatgacgattcagagatctttagcgaatttgatgagtgtggaaagagtacagag
caggtcgccgctttctgtcgcagtctccatgacatgaatccctcagagtgcgtgtcctct
tcgccgagcccggactcacccttcccgcctacagcaactccccgacagctgtctgacgcc
gacaagctccgcaaagtgatctgtgaacttgtggagaccgaacgcacctatgtcaaagat
ctcaattgtctcattgggagatatttaaccccactgcagaaagagaatttcctcacacaa
gatgagctggatgttctatttggcaacttgccagaaatggtggaattccaggttgagttc
ctaaaaacactggaagacggaaccagattggttccagatctggagaagctggagagtgtg
gatcagtttaagaaaatactcttttctttgggaggctctttcttgtactatgcggaccgt
tttaagatctacagtgctttttgtgccagtcacaccaaggtcccaaaggttctcgtgaag
gccaaaactgaccctaatttcaaggcctttcttgatgagcggaaccccaagcagcagcac
tcctccaccctggaatcctatctgattaaacccatacagagggtgctaaaataccccctt
ctgctaagggagctttactcactgacagacccggacagtgaggaacactaccacttggat
gttgctataaaggccatgaacaaggttgccagccacatcaatgaaatgcagaagatccat
gaggagtttggagcagtgtttgaccagctaatcactgagcaaagcagtgaaaagaaagac
gtggctgatctatcgatgggcgatttgctgcttcacaacacagtgacatggatcaacccg
cctatgtctctgggaaaatggaagaaagaaccacagatggcaacatttgttttcaaaact
gcggtggtgtttgtatgcaaagaagagtccaagcagaagaagaaaattggcggctcacat
cgagtttctgtatcttcggaagaaaaagatcctttccgattccgtcacatgattccgaca
catgcccttcaaatcagatccatgtcaaatacagacggtgagagttctgctatgtgtgaa
atagttcacacaaaatcagagtcagaaggaagaccagagaggacgtttcacctgtgttgc
agctctccagagagcagaaaggaatttctgaagacagtccactccatcttgagggaaaag
caccgccgacagctcctaaaaacagagagtttacccctcaaccaacagtatgtgccattt
ggaggaaaacgactctgtgccctgaaaggagcccgtccagccataaatagagccgcatct
gccccaaccaggactctaggcaggagaaagctggtgcgcaatcgtttcaccatagacacc
gatattgtttttgatggggactcggaacagcaggacctcacttcaccacaggaaaccgag
tcagttccgctgcagcagaaggaggagcagcagtctgagctcgcgggagacacagaccgc
tgggtggaggagcagtttgacctagaagagtatgaagaccaggaagaaatgaaggagaca
gacatcctaagcgatgatgacgacgagttttgccaaacacccagagctctatctgaagag
gctgatctggagagccccctgatggctttatccctggagggtgcagaaacagatgggagt
aagagcctgccgtctccaactgtgagcgacacaccagatgaagagaagatatccaacaca
gagaggaagagctctgtaaccaacaactccgaggataagaatcaagcagagaaagctgag
gtttgggttagaagggagccgtcagattcatctctagaatgccccacataa
DBGET
integrated database retrieval system
