Poeciliopsis prolifica (blackstripe livebearer): 129359103
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Entry
129359103 CDS
T09758
Symbol
mmp13b
Name
(RefSeq) collagenase 3
KO
K07994
matrix metalloproteinase-13 (collagenase 3) [EC:3.4.24.-]
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pprl01002
]
129359103 (mmp13b)
Peptidases and inhibitors [BR:
pprl01002
]
Metallo peptidases
Family M10
129359103 (mmp13b)
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Paralog
GFIT
Motif
Pfam:
Peptidase_M10
Hemopexin
PG_binding_1
Reprolysin_3
Peptidase_M66
Reprolysin_5
Reprolysin_4
DUF4953
Metallopep
Motif
Other DBs
NCBI-GeneID:
129359103
NCBI-ProteinID:
XP_054884473
LinkDB
All DBs
Position
Unknown
AA seq
484 aa
AA seq
DB search
MNPVACLDNSVSTMFPLLVLLLLSVLVQYSFALPLPTGKKENLVTEKVDDFLIAEKYLRH
YYGLPTGLQSRQSSSSDFKNKVQQMQRFFKLQVTGNLDDNTLEIMKLPRCGVPDVAEYTH
FPRHPKWETNNVTFKIVNYTPDLKKSDVVRAIRNALNVWADVTPLNFKRIHDGNADIMIS
FGTKEHGDYNPFDGPDGLLAHAYPPGPGIGGDTHFDEDEHWTKDSSAYNLFMVAAHELGH
ALGMGHSSDAGALMYPVYSFATGYPLAEDDVEGIQALYGRNPNPRKRKIKPDAPNKCDPE
LSFDAVTELRGETIIFKDSFYWRLHPQMAEPEQTLIKSTWPSLPKKVDAAYENPEKDLVF
IFSGIRVWALNGYSLVDGYPKYIHKLGLPKSVRKIDAAVHIKNTGKTLLFVDEEYWSYDE
ATGTMDPGFPKSVEDDFPGMHDEFDAVTFHQGYLLFFHGNMQYEYSYRFRKVIRIMRTNS
FLNC
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaatccagtggcttgtttggacaactcagtgtcaacaatgtttcctttgctggtgctg
ctgctgctgtcggtgttggttcaatactcctttgctctgcctctgcctactgggaaaaaa
gaaaaccttgtcacagaaaaggtcgacgacttcttgatagccgagaaataccttcgtcac
tactatggtcttccaactggtctccaaagtagacagtcatcatcaagtgattttaaaaac
aaggtccagcaaatgcaaagatttttcaagcttcaggtaactggaaatcttgatgacaac
accctggagatcatgaagctgcccagatgtggtgtaccagatgttgcggagtacacacac
ttccctcgacaccccaaatgggaaaccaacaatgtcacgttcaagattgtgaattatact
cccgatctcaagaaatctgatgtagtcagagcgatccgaaacgcgctgaatgtttgggcg
gatgttacccctttgaacttcaagaggatccatgatggcaatgcagacattatgatcagc
tttggaactaaagagcatggtgactacaatccatttgacggacctgatgggctgctggct
catgcctaccctccaggcccaggcattggaggagacactcactttgatgaggatgaacat
tggaccaaagattcatcagcatacaatctgttcatggtagcagcccatgagttaggtcac
gcactcggtatgggccattcatcggacgcaggtgccctgatgtacccggtctactcgttt
gcaactggctacccactagctgaagatgatgttgaaggcatccaagctctctatggtcgc
aaccccaatcccaggaaaaggaagataaaacccgatgcacctaacaaatgcgatcctgag
ttgagttttgatgctgtaacagaactacgaggagaaaccatcattttcaaagacagcttc
tactggcgtctccatccacagatggcagaacctgagcagacactgatcaagtccacatgg
ccctccctgccaaaaaaagtggatgcagcatatgagaatccagagaaggatttagtcttc
atatttagtgggatccgtgtgtgggccttgaatggatattcactcgtggacggctatcca
aagtacatacataaacttggtcttcccaaatcagttagaaagatagatgcagctgtgcac
ataaaaaacactggaaaaactctgctctttgtcgatgaagaatactggagttacgatgaa
gcaacaggtaccatggaccctggttttccgaaatctgttgaggatgattttccagggatg
catgatgagtttgatgctgtcacttttcatcagggctacttgttgttcttccatggaaat
atgcagtatgaatacagctacagattcaggaaggtgatccgcattatgaggaccaactcc
ttcctcaactgctag
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