Poeciliopsis prolifica (blackstripe livebearer): 129359349
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Entry
129359349 CDS
T09758
Symbol
trpc6b
Name
(RefSeq) short transient receptor potential channel 6
KO
K04969
transient receptor potential cation channel subfamily C member 6
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pprl04040
]
129359349 (trpc6b)
Ion channels [BR:
pprl04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
129359349 (trpc6b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
PKD_channel
Ank
Ank_4
Ank_3
Ank_5
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
129359349
NCBI-ProteinID:
XP_054884890
LinkDB
All DBs
Position
Unknown
AA seq
851 aa
AA seq
DB search
MIKRSRTLTLRQSQKSRWFSERRALMMAGHVGAKHRRQTARGAGYLFQAHPSSCLSIAEE
VFLEAAEYGNIPEVRRMLEELPHLNINCVNYMGQNALQLAVASEHLEVVKLLLKRKELAK
LGDALLLAISKGYIRIVEAILSHEAFADGQRLTKNPRHDKTRDDFFSYDEDGTRFSHDIT
PIILASQCHEYEIVHMLLLRGAHIERPHDYFCQCRACIEQQRLDTFCHSQSRISAYKGLA
SPAYLCLSSQDPVMAALELSNELALLANTEKEFKNDYKKLSMQCKDFVVGLLDLCRNTEE
VEAVLNGDMESIANTATSAKPNLIRLKLAIKYEVKKFVAHPNCQQHLQSIWYENLTGLHQ
QTVAVKVLFVFGVAIGLPVLAFIYWIAPSSKLGKLMRGPFLKFVAHAASFIIFLCLLVLN
AADRFAGTSLLPNMTTHDYPSQVFRMKTTSFTWMEILIIFWVIGKIWEECKDIWSQDIHE
YILEPWNLLDFSILAIFMTSFIARLMAFWHAHSAQCYIDKHPFNMTLPSEVQYFQLARIH
WMPSDPQLISEGLYAIAIVLSFSRIAYILPANERFGPLQISLGRTMKDIFQFMVIFMTVF
VAFMVGMFDLYSYYLGAKHNVAFTTVEESFKTLFWAIFGLSEVKSVVLNINHKFIENIGY
VLYGVYNIIMVIVLLNMLIAMFNSSFQEIEDDADVEWKFARAKLWFSYFEHGSTLPVPFN
LIPSPKSVMSFLLGIKTLIGSSRKSKENSNNDMDLKNLREHGGLKEDSSVQPTRHQKVMN
CLIKRYIFKAQRDKDNDEVNEGELREIKQDISSLRYELLERGNHDLNTLADLVRQLGEVV
QKEEQRGVVIS
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atgataaaacgcagcaggactctcactttgaggcagtctcaaaaatccagatggttcagt
gaaaggagagccttgatgatggcggggcatgttggagccaaacatcgaagacaaacagct
cggggagctggttacctgttccaagctcacccttcctcctgcctctccattgctgaggag
gtgttcctagaagctgcagagtacggcaacatccccgaagtgaggcggatgctggaggag
cttccacacctcaatatcaactgcgtcaactacatggggcagaatgcactgcagctggca
gtcgcgagtgagcacttagaagtggtcaagcttttgcttaagaggaaagaacttgcaaaa
ctgggggatgctttgctgttagccatcagtaaagggtacatccgcatagtggaagccatt
ttaagccacgaggcgtttgcagatggtcagaggttgacgaagaaccccaggcatgacaag
acacgggacgactttttctcctacgatgaggacggcacgcgtttctctcatgacataact
cctattatcctggcttctcagtgtcacgagtacgagatagtacacatgctactattaagg
ggggcccatatagaacgtccccatgactacttctgtcaatgcagggcctgtattgagcag
cagaggcttgacaccttctgccactctcagtctcgtatcagtgcttacaaaggcctcgca
agcccagcgtatctttgcctttcgagtcaggatcctgtgatggcagctttggagctgagc
aatgagctcgcacttctggccaacactgagaaagagttcaagaatgactacaagaaattg
tccatgcagtgcaaggactttgtggtgggactcttggatttgtgtcggaacacagaggaa
gtggaggcggttctaaatggtgacatggaatccattgctaacacagcgacctctgccaaa
ccgaacctgatcaggttaaagctggcaataaaatatgaagttaaaaagtttgtggcccat
ccaaactgccagcagcatctccaatcaatctggtatgagaacctgactggactgcatcag
caaacagttgcagttaaagttctttttgtcttcggtgtagctattgggttacctgtccta
gcttttatttactggatagcaccatcaagtaagttggggaaactcatgcgtggacccttc
ctgaagtttgtggctcatgcagcttccttcatcatattcctctgtctgctggttctaaac
gcagcggaccgcttcgcaggaacatcactgctcccgaacatgaccacccacgattaccct
tcacaggttttccggatgaagaccaccagttttacctggatggagattcttatcattttc
tgggttataggcaagatatgggaagaatgtaaagatatttggtcacaagacatccacgag
tacatcttagaaccatggaaccttctcgattttagtattttggccatttttatgacctct
ttcatcgcaagattaatggctttctggcatgcacattctgcacagtgctacattgacaag
catccattcaacatgaccttgccttctgaggtgcaatattttcagctggcaagaattcac
tggatgccctcagaccctcagcttatctccgaaggtctctatgcgattgccatcgttctg
agtttttcccgcattgcgtacatcctgcctgccaacgagaggtttgggccgttgcagatc
tctctgggaagaacgatgaaagacatttttcagttcatggtgattttcatgacggtgttt
gtcgctttcatggtgggaatgttcgatctatactcatactaccttggagccaaacacaac
gttgcctttacaacggttgaagaaagttttaaaacattattctgggccatcttcggactg
tcagaagtaaaatctgtggtattaaacatcaaccataagtttattgagaacataggctat
gttctgtatggcgtgtacaacatcatcatggtgattgttctgctgaacatgctcatagcc
atgttcaacagctccttccaggaaatcgaggatgatgctgacgtggagtggaaatttgcc
cgagccaaactctggttttcctactttgagcatggcagcactctgcctgtacccttcaac
ctcattcccagccccaagtctgtgatgtccttcctactcgggataaagacattgatcgga
tcttcaagaaaaagcaaagagaattcaaacaatgacatggatctaaaaaatttaagggaa
cacggaggactgaaggaggactcatctgttcaacctacgcgtcatcaaaaagtaatgaac
tgcctcatcaaacgatacatatttaaagcacagagagataaagataacgacgaagtgaat
gaaggtgagctgagagagatcaaacaggacatctcgagccttcgttacgagctgctggaa
agagggaaccatgatttaaacacactggccgatcttgtcaggcagctgggagaggttgtg
cagaaagaagagcagagaggggttgtcatttcttaa
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