KEGG   Poeciliopsis prolifica (blackstripe livebearer): 129359944
Entry
129359944         CDS       T09758                                 
Symbol
smndc1
Name
(RefSeq) survival of motor neuron-related-splicing factor 30
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
pprl  Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pprl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    129359944 (smndc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pprl03041]
    129359944 (smndc1)
Spliceosome [BR:pprl03041]
 Complex A
  U2 snRNP components
   U2 related factors
    129359944 (smndc1)
 Complex B
    129359944 (smndc1)
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    129359944 (smndc1)
SSDB
Motif
Pfam: SMN_Tudor TUDOR DUF2730 SGF29_Tudor Atrophin-1
Other DBs
NCBI-GeneID: 129359944
NCBI-ProteinID: XP_054885898
LinkDB
Position
Unknown
AA seq 238 aa
MSEDLVKQLSSYKAQLQQVEVALSTDPDNEDLRKLQKDLQEVIDLTKDLLTSQPADGASS
TSGSESVPVKKNWKVGERCLAMWSQDSQVYEAEIEEIDRENGTAAVTFTEYGNAEVIPLQ
NLKVVEEGKRSEDDGGLKSKSRKEQIAEQREYKKKKAQKKVQRMKELEQEREEQKSKWQQ
FNNKAYSKNKKGQVKRSIFASPESVNGKVGVGTCGIADKPMTQYNDTSKYNVRHLMPQ
NT seq 717 nt   +upstreamnt  +downstreamnt
atgtcggaagatttggtgaaacagttgagcagctacaaagctcagctacagcaagtggaa
gttgccttatcaaccgatccagataatgaagacctccgaaaacttcagaaggacttgcag
gaagtcatcgatctgactaaagacctcctgacttcgcagcccgctgatggggcttccagc
accagcggctcagagtcagtgccagtgaagaaaaactggaaagtgggtgaacgatgtttg
gcaatgtggagccaggatagccaggtgtatgaagctgagattgaggagatagaccgagag
aacggcactgcggccgttacgttcacagagtacgggaatgctgaagtgattcccctgcaa
aacctcaaagttgtggaggaagggaaacgatctgaggacgacggaggtttaaagtcaaag
tcaagaaaagagcaaatagcagaacaacgagagtacaagaagaagaaagctcagaaaaag
gtacagaggatgaaggagctggagcaagagagggaggagcagaaatctaagtggcaacaa
ttcaacaacaaagcttactcaaaaaacaagaaaggacaggtgaagagaagcatatttgca
tcaccagaaagtgtaaatggaaaggtgggagtgggaacatgtggcattgcagataaacct
atgacccagtataatgacacatccaaatacaatgtcagacatctgatgccacaatga

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