Poeciliopsis prolifica (blackstripe livebearer): 129362980
Help
Entry
129362980 CDS
T09758
Name
(RefSeq) protocadherin gamma-C5-like isoform X1
KO
K16497
protocadherin gamma subfamily C
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pprl04515
]
129362980
Cell adhesion molecules [BR:
pprl04515
]
Cadherins
Protocadherins
129362980
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_tail
Cadherin_2
Cadherin_CELSR2_9th
Cadherin_C_2
Bact_surface_Ig-like
Motif
Other DBs
NCBI-GeneID:
129362980
NCBI-ProteinID:
XP_054890811
LinkDB
All DBs
Position
Unknown
AA seq
985 aa
AA seq
DB search
MDSRQRKRSGGGTLWRIYLYLACVCSASAELRYSVSEELSPGSVVGNIAKDLSYTAQRIV
QRKLRVVSESAVEYFEVKQATGDLIIKQKIDREQLCELSSTCSQQIQIMLEEPLEIHRVM
VDILDVNDNAPQFSTSNISLEVSEAAAPGTRFRLESAHDPDVGTNSLRTYHVATNDFFTL
NVQTKSDGSKFPELVVDKPLDRETRASFRLLLTAVDGGQPEKSGSTLLLIKILDVNDNAP
VFAETVTKVTLSENVAQGTLVTKLNATDADSGSNGEISFLFSKYTPERVLQLFTVDSKSG
EIRVKGDVDYEKAASYHITVQARDGGYPAMEGSCNVIVDIIDVNDNAPEVTLMSPTSSIR
EDSPPEKVIAVITAKDLDSGDNGKVTLTIPPGLPFKLVLAFDGHYSLKTAGSLDRETVPE
YTVVIKATDAGSPPLSSQKTFVVKLLDVNDNAPSFSQPSYSVDIPENNSPSSPIAAVSAT
DSDLGENARISYAILPSMVQDSPISSYVYISPETGHIYSMRSLDHEKLNAFCIQVQARDA
GEPPRATNVTVHVFVVDVNDNSPVIVYPSYPKDKRLQLTVPPSAGPGHVINKLVAVDADS
GHNAWLFYSIAPGPNVGMFCIGAHTGELRTARKWAEEEEGSTYDITVIIQDNGDPPRSSS
VNITVTVDEKATAIDVPVNTRHNHFYHHNGMSNITLYLIISLACVSGVAFITFMVLMVRC
LRHRDSGLGDSECCCYGRHRSSRYHQRPSKDLHLQLNTDGPIRYMEVVGGPQEPHTRTYR
PCYSTISSRSDFVFMKTPMLSHNNTLNMTLSRKNLMNSAIEQKPPNNDWRFTQGQRPGPS
GPHMPYGTHIRWTPKNGTRATGGPEVAMGTGPWPQPPTEAEQLQALMAAANEVSEATATL
GPGTMGLSTRYSPQFTLQHVPDYRQNVYIPGSTATLTSNPQQQQATAQQATQQALPPPQA
SAQAEPPKAAQTPASKKKSTKKEKK
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atggactccaggcagaggaagcgctccggaggagggacgctgtggaggatttacctctat
ctagcctgcgtgtgctcagcgtccgctgagctcagatattccgtatcagaggaactaagt
ccgggctcggtggtcggaaacatcgcgaaagatctgagctacacggctcagagaatcgtc
cagaggaagttacgggtggtctccgagtcggcggtggagtatttcgaggtgaaacaggca
actggtgatttaattattaaacaaaaaatcgacagggagcaactgtgcgagctgagttca
acatgctcgcaacaaattcaaattatgctggaggagccactggagatccaccgcgtcatg
gtggacatcctggacgtgaacgacaacgcgccgcagttttcaaccagcaacatttccctg
gaggtatcggaggcggccgcgccgggcacgcggttccgcttagaaagcgcacacgatcca
gacgtgggcaccaactccttacgcacttaccatgtggctacaaatgacttttttacactg
aatgtgcagactaagagtgacggcagcaagtttccagaacttgtcgtggataaacctctg
gacagagaaacacgggcctcatttcgcctgttgctcactgccgtggacggggggcagccg
gagaagtccggctcgacacttttgctcattaaaattctggatgtaaatgacaatgctccg
gtctttgccgagacggtgacgaaggtgacgctgtcggaaaacgtcgcacagggcacttta
gttacgaaattaaatgcgactgacgctgactctggcagcaacggtgaaatatcattcctg
tttagtaaatacacaccagaacgtgttctccagcttttcactgtggactctaagagcggg
gagatccgcgtgaagggggatgtcgactacgagaaggccgcatcttatcacatcacagtg
caggccagagatgggggataccctgccatggagggttcctgtaacgtcatagtggacatc
atcgatgtgaatgacaatgccccagaggtgacactgatgtcaccgaccagctccatcaga
gaagactcgcctccagagaaagtgattgctgtcataactgctaaagacctggactctgga
gacaatggaaaggttacattaaccattccaccaggcttgccatttaaacttgttttagcc
ttcgatggccattatagtttgaaaaccgctggcagcctggaccgagaaactgtcccagag
tacacagtggtcatcaaggcgactgatgctggctccccacctctctcatctcagaaaacc
tttgtagtgaagctcttggatgtaaatgacaatgctccatctttctcccagccttcatac
tctgtggacatccctgagaacaattccccaagctctccgatcgctgctgtttctgccaca
gactccgatctgggtgagaatgctcggatctcctatgccatccttcccagcatggtccaa
gattcgcctatttcttcttatgtgtacattagccctgaaactggccacatatacagcatg
cgctcccttgaccatgagaagctcaatgccttttgcattcaggtgcaggcccgggacgca
ggggaacccccacgggcaacaaacgtcactgtccatgtctttgttgtggatgtgaatgac
aactcgccagtgattgtttatccctcctacccaaaagacaaaagactgcagctcactgta
cccccatctgctggcccgggccacgtcataaataaactggtggcggtggatgcagacagc
gggcacaatgcgtggttgttttactcaatcgctcctggaccaaatgttggcatgttctgt
atcggggcccacaccggggagctccgcacagcccgcaaatgggccgaagaggaagagggc
tctacttatgacataacggtcatcatccaggacaatggtgacccaccgagatccagctcg
gtgaacatcaccgtaactgtggatgagaaagccacagccattgatgttccagtgaacact
cgacacaaccacttctaccaccacaacggaatgtctaacatcactttatatctcataatc
tctcttgcatgtgtgtcgggtgtagctttcatcacatttatggtcctcatggtgcgatgc
ctaaggcaccgtgactcagggctgggagactctgaatgctgctgctatggccgccacagg
tccagccgctaccatcagaggcccagcaaagacctgcacctgcagctcaacactgacgga
cccatacgatacatggaggtggtgggagggccccaggagccacacacacgcacctatcgg
ccctgctactccactatatctagtcgaagtgactttgtatttatgaagacacccatgctg
agtcataacaacacgctcaacatgacgctcagcaggaagaacctcatgaactcagccatt
gagcaaaagccccccaacaatgactggcgcttcacacaaggacagagacctggacctagt
ggtccccacatgccatacggtacacacatacgatggacgccgaagaatgggacaagggca
actggaggacctgaggtagcaatgggaactggcccgtggccccagcccccaaccgaagcc
gagcagcttcaggcactgatggcagcagccaacgaagtaagtgaggcgacagccaccctt
gggcccggcaccatgggcttgagcacccgctacagcccccagttcaccctgcagcacgtc
cccgactaccgccagaatgtgtacatccccgggagcacggccaccctcacctccaatcct
cagcagcagcaggccacggcccagcaggccacgcagcaggcgctgcctccgcctcaggcc
tcggcacaggctgagcctccaaaggccgcccagacccccgcctccaagaagaagtccacc
aagaaggagaagaagtag
DBGET
integrated database retrieval system
