Poeciliopsis prolifica (blackstripe livebearer): 129362997
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Entry
129362997 CDS
T09758
Symbol
pcdh1g22
Name
(RefSeq) protocadherin 1 gamma 22
KO
K16497
protocadherin gamma subfamily C
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pprl04515
]
129362997 (pcdh1g22)
Cell adhesion molecules [BR:
pprl04515
]
Cadherins
Protocadherins
129362997 (pcdh1g22)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
BppU_N
Motif
Other DBs
NCBI-GeneID:
129362997
NCBI-ProteinID:
XP_054890871
LinkDB
All DBs
Position
Unknown
AA seq
817 aa
AA seq
DB search
MRNKLSTWQVLLWWHHFFILWSTIDSQTRYSIPEELKQGSVVGNIAKDLGLLVPELFRRK
MRITSEAGKQYFNVDLGKGELLVTDRIDREELCGQRPSCLLPLELVIDDPLQVHRVEIEV
EDTNDHSPSFLTKEKVVKIAELVNPGARFPLESATDPDVGANSIRTYLISKNEHFKLTVK
NLKDGRKIPELVLEKALDREKQAVHNLVITAVDGGDPVRSGTSEIKVIVLDINDNAPQFE
KQVYEANVSERSAIGTEILQVKASDADEGLNGEIEYVFAEQTSDMISSLFDINPSTGVIT
VKGVLDHESNSLHRFDVTAKDKGNPEMDGHCGVEIKINDINDNNPEIVVTSLTTPVPEDS
PIGTVIAIISTRDADSGDNGKVTLTLSPKSPFKLNPSISKHFSLVTSGPLDRETNSQYSV
KITASDSGKPSLTSEKTIIVQLLDVNDNPPIFSQSLYAVYVKENNAPGIILCSVSASDLD
SGENAKISYSILDSKVQDVSVSSYVYINSENGSIYSMHSFDYEKLKVFQIQVQAKDQGSP
SLSSNATVHVFILDQNDNTPAVIYPSSAALGSLSHQRMPRSAKAGHLVTKVTAVDADSGH
NAWVSYRLAEATDASLFTVNQYTGEVRTKRAVYEQDDSSQRLLIEIKDDGQPVQSATATV
SILLEDGLHEPILDLRHKMSEPSKKTGRITLYLILSLASVSVLSLVTFLILAVKCIRGSR
SSGSCCMRRSDCDDYKNPNRNLQIQLNTDGPIKYVEVLGGDMMSQSQSFRSCMSPMSEYS
DFTLIKPSSTTDFKEVISVLDASLPDSTWTFESQQVS
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgcggaacaaattgtcaacatggcaggtgcttttgtggtggcatcatttcttcatcttg
tggagtacaatagactcacagactcgctacagcattccggaggagctgaaacagggatcc
gtggtgggaaatatagccaaagatttgggtttgcttgtacctgaactgtttcggcgtaaa
atgcggatcacctcggaggctggtaagcagtattttaatgtagacttggggaagggagag
ctgctggtgaccgacagaatagacagggaggaactgtgcggacaaagaccctcctgtttg
ctgcctttggagctggttatagatgacccgctgcaggtgcacagagttgaaattgaagta
gaggatacgaacgatcattcccccagttttcttacaaaagagaaagtggtgaaaatcgca
gagttagttaatccaggtgcgcggtttcctttagagagtgccactgatcctgatgtcggc
gctaattccatacgcacgtatctcattagcaaaaatgagcattttaaattaacagttaag
aatcttaaagatgggagaaaaattcctgaactggtgcttgaaaaagctcttgatcgagag
aagcaggctgtacacaacctcgtcattacagctgtggacggaggagatccggtgcgttca
gggacatcagaaataaaagttatagtgctcgacatcaacgataacgcaccacaatttgaa
aaacaagtatatgaagctaatgtcagcgaaaggtctgcaattggaaccgaaatcctgcag
gttaaagcttcagatgcagatgaaggactgaatggagaaatagaatatgtgtttgcggag
caaacttcagatatgatttcatccttatttgacataaacccgtccaccggggttattact
gtcaaaggggttttagaccatgaatcaaattctttacacagattcgatgtaaccgcaaaa
gacaaaggaaatcctgaaatggacgggcattgtggagtggaaatcaaaataaatgacatc
aatgacaataatccggaaatagttgttacctccttaacaacacccgttcccgaagactct
ccaataggaacagtcattgcaatcataagcacacgagacgcggactcaggtgacaatggg
aaagtgacattaactttgtcacccaaatccccgtttaaattaaatccgtcgatctctaaa
catttttcacttgtcacaagtggcccacttgaccgtgaaacaaacagccagtatagtgta
aagataacagcctctgattctggaaaaccgtcattaacaagtgaaaaaacaataatagtt
caacttttagatgtaaatgacaatccaccaattttctctcaaagcttgtatgcagtttat
gtaaaagaaaacaatgctccagggataattttgtgctcagtgtcagcatctgatttagat
tctggtgaaaacgcaaagatctcttactccatactggactctaaagtgcaggacgtctct
gtctcgtcttatgtttacattaattcagaaaacgggagcatctacagcatgcactcgttt
gactatgagaagctgaaagtgtttcagattcaggtccaagcaaaggatcagggctctccg
tctctcagcagcaacgccactgtccatgttttcatcctggaccagaacgataataccccc
gctgttatttacccctcctccgctgccctgggctccctctctcaccagaggatgccccgc
tctgctaaagcgggtcacctggttaccaaggtaacggccgtggacgctgactcgggccat
aacgcctgggtctcgtatagactggcggaggccacagacgcctctctgttcaccgtcaat
cagtacacaggagaggtgaggactaaacgcgctgtgtacgagcaggacgactcctctcag
aggctgctgatagagatcaaggacgacgggcaaccggttcagtccgccaccgccacggtg
tccatcctgctggaggacggtctccatgaacccattttagacctccgacacaaaatgtcc
gagcccagcaagaaaaccggcagaatcaccctttatttgattctgtctctggcctcagtg
tccgtgctgtctctggtgacttttctcatcctggcggtgaaatgcatcaggggcagcaga
agcagcgggagctgctgcatgagaaggagcgactgtgatgattacaagaaccccaacaga
aacctgcagattcagctcaacactgacggacctataaaatacgtggaggtcctgggagga
gacatgatgtctcagagtcagtccttcaggtcctgcatgtctcccatgtcagagtacagt
gatttcacgttgatcaaacccagcagcaccacagactttaaagaagtcatcagtgttctg
gacgcgtctttacccgacagcacctggacctttgagagtcagcaggtgagctaa
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