Poeciliopsis prolifica (blackstripe livebearer): 129363859
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Entry
129363859 CDS
T09758
Symbol
smcr8a
Name
(RefSeq) guanine nucleotide exchange protein smcr8a
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
129363859 (smcr8a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprl04131
]
129363859 (smcr8a)
Membrane trafficking [BR:
pprl04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
129363859 (smcr8a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Folliculin
Motif
Other DBs
NCBI-GeneID:
129363859
NCBI-ProteinID:
XP_054892155
LinkDB
All DBs
Position
Unknown
AA seq
957 aa
AA seq
DB search
MTVCASAASHASLSGNTMIGSPDVVAFTKEDEYGQTSQDPLGLPEEFSVPLHPLADSNPW
AKTSYAKFTKDFILISEFSEQVGPQPLLTIPGDPKVCGTFDLNYFSLRIMSVDYQASFVG
HPPGSGYPRLSFVEDSRVVLGDSKEGAFAYVHHFTLYDLEARGFVRPFCMAYVAADEKKI
MLQFQELSLRFSQASECLKAGNRRAFAKELQRKLQDLEYTHSVLQREEGLQREAGPQCVY
SAHAVEKANELANVEKSIYEHRDLLKQISAYHQRPRRDPHAVSCQKCMTECLRECEELLD
KYAKLANPLGFIHRVSKGEGDEIESDDNGGEEEADEDEDDGNKRRPSYTPQLIKAKSAKC
FAKRLKTLQELCEDNFYEATVELLKETERSFRGDLCYLYTRRLDKALRRKQKIVNFLFEA
DLIDDVQDEADTLRPFCAVNHAIDNYMHLNPPHIVLGPEALELDGLRPQDPLGLACEAAT
TQELGLLGSHLESSPSDQTLETQGSSEGTKESFSSDKSGTDQTEKQESLASINTEGPDPD
SDLTPEPDQNTYPERESSSEDMETTAGEDDCDTRQDQTPVSLLEVVSELEARKDDECDVG
MHSELLAPMDTACCMAQEGFLYEAADPDTVPCLSPNSTLSPYKVLVVNQEPHALHPIQDE
YTVGSPCSAAGLELPVGVFGDAASRSSMEDGSDCTMSASTGSDRAASPLGYGGSVTLRQR
KKAGQGALRFVRQYSFAMQALWCLLSGRTLVVLGADEGRVRRLVSALALFVPNPGKSGER
VQPWLSCPFTLIDLHRWKLIGLQRVASPAGSSTLYSLSRYSRYISILDVDMKTLRCPQYR
GQLLANMADHRTYIRRGSTYFLHLQSELCRLAARAFLLTFTHHLHLPVSPTEGPEAVEAR
RRGFLQEQLGLDEEDGQILLYLSRLIAQRYLRPANSDCCAAVPCFSFNYAASVLYKI
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgactgtttgtgcttctgctgcttctcatgcctccctcagtggtaacactatgataggc
tccccagatgtggtagctttcactaaagaggatgaatacgggcagactagtcaagaccct
ctgggtctcccggaggagttctccgtacccctccacccgctggccgactccaacccctgg
gccaaaacctcctacgccaaattcaccaaagacttcatcctcatctctgagttctcagag
caggtgggtccccagcctctcctcaccatcccaggtgaccccaaagtctgcggcaccttc
gacctcaactacttctccctgcggatcatgtccgtggactaccaggcctccttcgtgggg
catccgcccggcagcggctacccgaggctcagctttgtggaggactccagggtcgtcctg
ggagactcgaaggagggagcgttcgcgtacgtccatcacttcaccctgtacgacctggag
gcgagaggcttcgtgcggccgttctgcatggcgtatgtagcagcggacgagaagaaaatc
atgctccagtttcaggagctgtccctccgcttctcgcaggcctcggagtgtctgaaggcc
gggaacagaagggcattcgccaaggaactccagcggaagctccaggacctggagtacacc
cactctgtgctgcagcgggaagagggcctgcagagagaggcggggcctcagtgcgtttac
tctgcccatgctgtagaaaaggccaatgagctggcgaacgtggagaagagcatttacgag
cacagagacctgctgaagcagatcagtgcctaccatcagcgaccacgacgggatccgcac
gccgtctcgtgccagaagtgcatgaccgagtgcttgagagagtgcgaagagctgttggac
aaatacgccaagctggcgaatcccctcgggttcatccacagagtctccaaaggagaaggc
gacgagattgaatctgatgataacggaggggaagaagaggcggatgaagatgaggatgac
ggtaataagcgcaggccatcgtacacgccacagctgatcaaagcaaagtctgcaaagtgt
ttcgccaaacgcctgaagaccttgcaagaactgtgtgaggacaatttctacgaggccacc
gttgagcttctgaaggagacggagaggagtttccgcggcgacctgtgttacctctacact
cgccgcttggacaaggcactgcgcaggaagcagaaaattgtcaacttcctgtttgaggca
gacctcattgatgacgttcaggatgaagccgacacactgagaccattctgcgctgtgaat
cacgccatagacaactacatgcacttaaatccacctcatattgtcctggggccagaggct
cttgagcttgatggattaagaccgcaagatccgctaggcctggcttgtgaagccgccact
actcaggagcttggacttctgggcagccatctggagtcctctccctcagaccagaccttg
gagacacaggggagctcagaagggaccaaagaaagcttcagcagcgataaaagtggaaca
gatcaaactgagaagcaagagagtcttgcaagtataaatacagaaggtcctgatccggac
tctgacttgacaccagaacctgaccaaaacacctacccagagagggaaagcagtagcgag
gacatggagaccactgccggggaggatgactgtgataccagacaagaccagacccctgtg
tctttgctggaagtcgtgtccgaactggaggccagaaaggacgatgagtgtgacgtggga
atgcactcagagctgctggctcccatggatacagcgtgctgtatggcccaagagggtttc
ctctatgaggcagctgaccctgacactgtgccttgcctgagtccaaactcgaccctgagc
ccctataaggttctggtggtcaaccaggagccccacgcccttcaccccatccaggatgag
tacacagtgggttccccatgctcagcagcagggctggagcttcccgtgggcgtctttgga
gatgcagcttcacgtagctccatggaggacgggtcagactgtaccatgagtgcttccacg
ggctccgaccgggccgcctcgccgctcggctacggggggtcagtgactctccgtcagagg
aaaaaagccgggcaaggcgctttgaggttcgtgcgccagtactcctttgcaatgcaagcc
ctgtggtgtctgctgagcggcaggacgctggtggtgctcggggcggacgaggggagagtc
cgccgcctcgtgtctgctctggcgctcttcgtacccaaccctggcaagagtggagagagg
gtccagccctggctgtcctgtcccttcaccctcattgaccttcacaggtggaaacttatt
gggctgcaaagggttgcttctcccgccggctccagcaccctatactccctgtcccgctac
agccgctacatctccatcctggacgtcgacatgaagaccctgcgctgccctcagtaccgc
ggccagctcctcgccaacatggccgaccaccgcacctacatccgccgcggctccacctac
ttcctccacctgcagagcgagctctgccgcctggcggccagggcattcctgctcaccttc
acgcaccacctccacctgccggtcagccccacggaggggcccgaggcggtggaggcccgg
cggcggggcttcctgcaggagcagctgggcctggacgaggaggacggccagatcctgctc
tacctcagccggctcatcgcgcagcggtacctgcggcccgctaacagcgactgctgcgca
gccgtaccgtgttttagttttaactacgccgccagtgttttatataaaatctga
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