Poeciliopsis prolifica (blackstripe livebearer): 129364077
Help
Entry
129364077 CDS
T09758
Symbol
traf6
Name
(RefSeq) TNF receptor-associated factor 6
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04010
MAPK signaling pathway
pprl04120
Ubiquitin mediated proteolysis
pprl04140
Autophagy - animal
pprl04144
Endocytosis
pprl04620
Toll-like receptor signaling pathway
pprl04621
NOD-like receptor signaling pathway
pprl04622
RIG-I-like receptor signaling pathway
pprl05132
Salmonella infection
pprl05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
129364077 (traf6)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
129364077 (traf6)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
129364077 (traf6)
04140 Autophagy - animal
129364077 (traf6)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
129364077 (traf6)
04621 NOD-like receptor signaling pathway
129364077 (traf6)
04622 RIG-I-like receptor signaling pathway
129364077 (traf6)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
129364077 (traf6)
09171 Infectious disease: bacterial
05132 Salmonella infection
129364077 (traf6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprl04131
]
129364077 (traf6)
04121 Ubiquitin system [BR:
pprl04121
]
129364077 (traf6)
Enzymes [BR:
pprl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129364077 (traf6)
Membrane trafficking [BR:
pprl04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
129364077 (traf6)
Ubiquitin system [BR:
pprl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
129364077 (traf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-C3HC4_3
zf-C3HC4_4
TRAF6_Z2
zf-RING_5
zf-TRAF_2
RING_XB3-XBAT31
TRAF3_RING
zf-rbx1
DM
zf-RING_11
U-box
CEP104_ZnF
Motif
Other DBs
NCBI-GeneID:
129364077
NCBI-ProteinID:
XP_054892474
LinkDB
All DBs
Position
Unknown
AA seq
570 aa
AA seq
DB search
MACCESSKGSLEEDSYDGPEGSLSECALLMQEKERESLLSPSESAGTLMNSSSSSLQAPA
PIQGYDVEFDPPLESKYECPICLMALRNAIQTRCGHRFCKNCIEKSIRDTGQRCPVDNEM
LSEDQLFPDNFAKREILSLTVRCPNSGCTDKMELRHLETHLTECEFATVPCQQCQQPIRK
GYLEEHKTVECQRRPMSCPDCVASFVFEDKEQHEQQCPFASVRCQYCEMDLIRDQMESHC
DIDCPKAPIACNFSMFGCKERMQRHDLAQHMQEFTQMHMRYMAEYLRSLSLNGMSPKPLR
TTGPSILAEDTGAAAPAAACSRLRGAASCSISSAASPPTQEMQRIREMDGRLVKQDHQLR
ELIILKETQAGQLGELRRRVSMLEETVKDLEAQQYHGIFIWRLRGFSALLRNQEAGMTVV
EHSPGFYTGRPGYKLCLRLHLQTPNAPRCSNFISLFVHTMQGTFDGQLTWPLQGTIRLAI
LDQGPECQHHVEVMETKPDLQAFQKPVISRNPKGFGYVTFLHLQQLTQKAFLKDDTLLIR
CEVTPRFDSTFHREGPAVQPRGPEASISKE
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggcttgctgtgaaagcagtaaggggagcttggaggaggacagctatgacggaccagaa
ggatcgctctctgaatgtgccttgttgatgcaggaaaaagaaagggaatctcttttaagc
ccatctgagagtgctggcaccttaatgaacagctcatctagtagtcttcaggcccctgcc
ccaattcaaggttatgatgtggaatttgacccaccccttgagagtaagtatgagtgccca
atctgtctgatggccttaaggaatgccattcaaacacgatgtggacatcgattctgcaag
aactgcattgagaagtctattcgtgatacaggacagaggtgccctgtggacaatgaaatg
ctgtcagaagaccaactgtttcctgataattttgccaaaagagagattctatcgctaact
gttcgctgtccaaactctggctgcactgacaaaatggagctccgacatttagagactcat
ttgactgagtgtgagtttgccactgtgccttgtcagcagtgccagcagcctataagaaag
ggctacctggaggagcacaaaactgttgagtgccaaagaaggcccatgtcttgcccagac
tgtgtggcatcctttgtttttgaggataaagagcaacatgagcagcagtgtccatttgcc
agtgtgaggtgccagtactgtgagatggatttgatcagagaccagatggaatcccattgt
gatatagattgtccaaaagcccccattgcctgtaactttagcatgtttggttgtaaggaa
aggatgcagcgacatgacctggctcagcacatgcaagagttcacacagatgcacatgcgt
tacatggcggagtacttgcgtagcctcagcctcaatggcatgtcgcccaaacctctcaga
actacagggccgtccattttggccgaggatactggtgctgcagcaccagcggcagcctgc
agccggctcagaggagctgcaagctgcagcatcagctccgccgcatctccacccacccag
gagatgcagaggatcagagagatggatgggcgattggtgaagcaggatcaccagctgcgt
gagctcatcatactgaaagagacacaagcagggcagcttggggagctgcggcgtagggtc
tcaatgctggaggaaaccgtgaaggacctggaggcccagcaataccacggcatcttcatc
tggcgcctcagaggtttctctgccctcctgcgcaaccaagaagcaggaatgacagtggtc
gagcacagccctggcttctacacaggccgtccaggctacaagctgtgtctgcgcttacac
ctgcagacgcccaacgccccacgctgctccaacttcatctctcttttcgtccacactatg
caaggaacttttgacgggcagctgacttggcctcttcaaggaacgatccgacttgccatc
ttagaccagggacctgagtgtcagcatcacgtggaggtcatggagacaaagccagacctg
caagccttccaaaaacccgtgatttcacgcaatcccaaaggatttggctatgttactttt
ttgcatctgcaacagctgactcagaaagcttttttgaaagatgacactctgctgatccgc
tgcgaggtgacgccacgttttgatagtacgtttcatcgggagggaccagccgtgcagcca
agaggacctgaagcatcgatttcaaaagaataa
DBGET
integrated database retrieval system
